Rhincodon typus (whale shark): 109927920
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Entry
109927920 CDS
T06055
Name
(RefSeq) transcription elongation regulator 1
KO
K12824
transcription elongation regulator 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109927920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109927920
Spliceosome [BR:
rtp03041
]
Complex A
U1 snRNP components
U1 related factors
109927920
Complex B
109927920
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
109927920
NCBI-ProteinID:
XP_048459894
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All DBs
Position
12:10925908..10959499
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AA seq
619 aa
AA seq
DB search
MNTFFSTADKEVEKPKEPSKEPAEPEPMEMEEEEPKEEPPKEKKEEPKEEVLTEEEKAAQ
KAKPVATTPVPGTPWCVVWTGDERVFYYNPTTRLSMWDRPDELVGRADVDKIIQEPPHKK
SENEKKPVKEETEPLEDEYDDEPIKAKKRKKDDLKDPESEKEAAMEAEIKAARERAIVPL
DSRMKQFRDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERK
EKKNKLQQSKEDFKKLLEDAKLTPRSTFSDFAAKYGKDSRFKAIEKMKDRESMFIEFITS
VRKREKEDSKSRTEKLKGNFFDMLSEHHLDSQLRWSKVKEKFESDSRYKAVDSSGLREDF
FKQYMEKLAKHIDSDKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEA
IQNFKALLSDMVRSSDVTWSDTRRTLRKDHRWESASLLEREEKEKLFSEHIEALTKKKRE
HFRQLLDETSAITLTSTWKEVKKVIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADF
RTLLKETKFITYRSKKLLHESDQHLKDIERILQNDKRYLVLECVPEERRKLIMAYIDDLD
RRGPPPPPTASEPTRRSAK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttttttctctacagcagataaagaagttgagaagccaaaagaacccagtaaa
gagccagcagaacccgagccaatggagatggaagaggaagagcctaaagaggaacctcca
aaagagaagaaagaggagccaaaagaggaggtgttgactgaagaagagaaggcagcacaa
aaagccaaacctgtggccaccactcctgtccctggcacgccatggtgtgttgtgtggact
ggtgatgagcgggtattttattataacccaacaacccgcttgtcaatgtgggatcggcca
gatgagttggttggaagagcggatgtggacaaaattatccaggagccgcctcataaaaag
tctgagaatgagaaaaaacccgttaaagaggagactgaacccctagaagatgaatatgat
gatgaaccaattaaagcaaagaagcgaaagaaggatgatctcaaagatccagaatctgag
aaagaggcagctatggaagctgagatcaaagcagcccgggagagggccattgtcccgctg
gattctcgcatgaaacagttccgagatatgctacttgagagaggggtctcagcattctct
acatgggagaaggaactccacaagattgtttttgatccgagatacctcctcctgaatccg
aaggaaagaaagcaggtttttgaccagtatgttaaaactagagctgaagaagaacgtaaa
gagaagaaaaacaaactgcaacaatcaaaagaagacttcaaaaagttactagaagatgca
aagttaactcccagatccactttcagtgactttgctgccaaatatggcaaagactccaga
ttcaaagcaattgaaaagatgaaagatcgggaaagcatgtttatcgagtttattaccagt
gtgaggaaacgagagaaggaagattcgaagagtcggacagagaagctaaaaggcaacttc
ttcgacatgctgtctgagcatcacctggacagtcagttacgttggagcaaagtgaaggag
aaatttgaaagtgactcgcgttacaaagctgtggatagctctgggctaagggaggatttc
tttaagcagtatatggagaagctagctaagcacatagactctgataaggagaaggaactg
gagcgccaagcacgaatagaagcaagtttacgagagagggagagagaggttcagaaagct
cgttcagagcagaccaaggaaattgatcgggaacgagaacagcacaagagagaggaagct
atccagaatttcaaagctttactgtctgatatggtccgttcttccgatgtgacatggtca
gatactcggaggacccttcgcaaagaccaccgctgggagtctgcttcattactggaacga
gaagagaaggagaaattatttagtgagcacatagaagcgcttacaaagaagaagagggag
cattttagacagcttctggatgaaacctcagcgattactcttacctctacatggaaggaa
gtgaaaaaggtcatcaaagaggatcctcgctgcatcaagttctcgtctagtgataggaaa
aagcagagagagttcgaagaatacattcgagataaatacatcacagccaaagctgacttt
aggacactgttgaaggagaccaaatttattacttacaggtcaaaaaaactactgcacgag
tcagatcaacatctaaaagacattgaaaggatccttcagaatgacaaacggtacttggtg
ttggagtgtgtgcctgaggagagacgcaagctcattatggcctacattgatgatcttgat
cggcgaggccctcccccacctcccacagcatcagaaccaaccagacgctctgccaaataa
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