Rhincodon typus (whale shark): 109928653
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Entry
109928653 CDS
T06055
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X2
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
rtp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109928653
03015 mRNA surveillance pathway
109928653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109928653
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109928653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
Nup35_RRM_2
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109928653
NCBI-ProteinID:
XP_020384188
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All DBs
Position
21:complement(35912573..35939923)
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AA seq
280 aa
AA seq
DB search
MAPSPTKRKEHTQEKSKDRTKEKSSIKESSEKERGRDKTRKRRSASTGSSSTSSSSSSGS
SSTSASSSGSSSSSASSRSGSSSSSRSSSSSTSSGSPSPSRRRHTNRRRTRSKSKSPKRD
DKERKKRSPTPRPTKVHIGRLTKNVTKEHIMEIFSTYGKIKLIDMPLDRFHPHLSKGYAY
VEFENPDDTEKALKHMDGGQIDGQEVTATAVLAPRPRPLPRRMTPPRRMPPPPPMWRRTP
PRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggctccatcgccaaccaagcgtaaagaacacactcaagagaaatccaaagacaggacc
aaggagaaatcaagtatcaaggagtcaagtgagaaagaacgaggtcgtgataagacccgc
aaaaggagaagtgcttcaactgggagcagcagcactagttccagctccagttcaggatcc
agttccacctctgcctccagcagtggatcgagctcatcctctgcctctagtcgctctgga
agttctagcagttctcgtagctccagttccagtacttcctctggatctccaagcccgtcc
cggcgcaggcacaccaacaggaggcgcactcgttcgaaatctaaatcaccaaaacgagat
gacaaggaaagaaagaaaagaagtccaactccgaggccaacaaaagtgcacattggcagg
ttgacaaagaatgtgaccaaggagcacatcatggagatcttctctacatatgggaagatc
aaactgatagatatgccgttggaccgcttccacccacacctgtccaaaggctatgcctat
gtggagtttgaaaacccggatgatacagagaaggctctgaagcatatggatggaggtcag
atagatggccaggaagtaactgcgactgccgtgttggctcctcggcccagacctttgcct
cgacgaatgacaccgccacgtagaatgccgccacctcctcccatgtggcgcagaactcca
ccacgaatgaggagaaggtcccgttcacctcgcagacggtcaccagtccgcagacggtct
cggtcacgatcaccaggacgccggcgtcaccgtagcagatccagctctaactcctcacga
taa
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