Rhincodon typus (whale shark): 109930564
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Entry
109930564 CDS
T06055
Symbol
virma
Name
(RefSeq) protein virilizer homolog isoform X1
KO
K22910
protein virilizer
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109930564 (virma)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
109930564 (virma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIR_N
Motif
Other DBs
NCBI-GeneID:
109930564
NCBI-ProteinID:
XP_048451404
LinkDB
All DBs
Position
4:complement(85466098..85611166)
Genome browser
AA seq
1858 aa
AA seq
DB search
MADTAAELLFLDTFKHSNSEQNTHVDVVRFPCVVYINEVRVIPPGVKAHNSLPDSRAYGE
TSPHAFQLDLFFNNVSKPSSPVFDRLGSLDYDENASIIFRPNNKVNTDGIVLRGWYNCLT
VAIYGTVDRVISHDRDSPPPPPPPPPPPQQQQQQQQQQQLQPQQLQLQQQQPTLKRNIKH
DWDKEDQYNENPPRPQPRGPRTPPGPPPPDDDEEETLPQTLGPNKVDESERREDYFEPIS
PDRSSNHQEVQLTDAEEEEEPPEEEKEDEEEDPEVEEEDEDQQTVESIEEEEGDVEEEAR
EEVDEDDGYEQISSDEDGIADLERENYKLSFDIDYTAEDLASVPTMAYDPYDRDIGPLLY
FNPPYRTKYENEVARLKELDLDNVGAANIDAAVKLKELLELYKDDRGAKWVMALEEVPSL
LVKGLSYVQLFESDQDHLKQLVDWTMDALSLHTAVTQPIALNVRQLKAGTKLVSSLAECG
SEGVSALSAAGIIDKLFVLLFAEHMSSSLKLNTLKALDSFVSVTEGMEKFLNSKTEEQKS
GYQRLVELILTDQTVRVVTAGSAIVQKCHFYEVLSDLERIASHLAESTPVPSNISEVDQD
VNIGQEKGNKSNEEVDLETPMDLDHLLEASNISEVEVEKIVSILDELLHLLETAPYSMTQ
PPVKSFPTAARITGPPERDDPVPALLRYLNSCHFLESLTLLLSIPATNGHPSVLQSIKDL
IKFLIQIQTGLLFLSTEYEATNLLIRALSQTSDQDQEEGIQSENSNDDALAIWLLYSLQA
LQYVSELFDYLNRGLAVEETDRADVLGTLHSLYLITFNPIGRNAVSHVLQLDKNLSSLIT
LMEYYSKELLGDTKSRKSVACNYACMLILLTVQSTHDAQMLEQHSAGLLRLCKADDTNPK
LQELGKWLEPLKNLKFEINCIPSLLEYIKQNLDNLTIQMTQEGAGLTTALRVLCHIACPP
HPLEGQQKDLKWNLAIIQLFSAEGMDILIRILQKLNSVLILPWRLHANMGTTLQRIMILS
ITRCTLSLLKAMLTELLRGGSFEFKDVRVPTVLVTLHMVLCSIPLSGRLDDEEQKIQNDI
VDILLTFTQGVNEQVAYSEESLANNTWSLMLKEVLSFVLKTPEGFFSGMLLLSELLPFPL
PMQTTQPISSEGIAIALNTRKLWSIHLQIQAKFLQEIVRSSFGSTCQTLQQILRRVCIQL
CDLASPTALLILRTVLDLIVEDLSSPLEGKERVSTAQTARLLALLDSLASHGACKAALLH
LLSGTSKGDERFVEVFQVMLELLQTAVDNVHHQHCAEYIASFVQSLCDQDISLMLTNSTE
GPGSDLEQLSNSLPNGELLSQICDSFLQALANSETTYTTVLTCLRTMMFLTEHEYGFFYL
KSALRQNNNAIHCLLKRVVHNFNKEMAELASSLLDFLRQIINTDSLGSCGDEGAPMEIDG
FQTPRSSALSAAEVKQLLKWKESADDHLLFELDKVVTELCKEDDSFDSLLENVVGLRQML
ESTPDVLPVTAQDVEPVLPVSESLPVQFNNRTAYVLADVLDDQLKTLWLSPFQTEEIDTD
IDMVKVDLIDLAEKYCCDMDLKAELERSFLSEPSSPAAAKVTGGFKLGKHKHETFITSSG
KSEYIEPAKRAHIVPPPRGRGRGGFGSNCRPHDIFRQRKQNTSRPPSMHVDDFVAAECKD
VPSSGPPPAKRTNKGPQKAPRGGFSGNRGGRGVFHSQNRFFSPPAPKEDLTFLPGHAVGL
LHPSTRNQFHLCGGISSPFYAANSLDEWGNYSRREGGRGSSWSVQNSPRGTYSENRGGQS
NFNKGLPSRQPSTGYRQSPRDRTSRGRGAGPSWGGGSSRGKFSGGSSGRGRHVRSFTR
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacagcggcagagctgttgtttctagatacgttcaaacactcaaactcagag
cagaatacgcatgtggatgtcgttcgctttccatgtgtggtttacataaatgaagttcga
gttattcctcctggtgttaaagctcacaacagcttgcccgacagcagggcatatggggag
acctcgcctcatgcgtttcagttagacctgtttttcaacaatgtcagcaaaccaagttca
cccgtttttgaccgattaggaagccttgattacgatgaaaatgcatcgattatatttaga
ccgaacaataaggtcaatacagacggaattgtcctgagaggttggtacaactgtctaact
gtggcaatttatggaactgttgaccgggtgataagtcatgacagagattcccctcctcca
cctccacctccaccccctccaccgcaacagcagcaacaacagcagcagcaacaacaactt
cagccgcagcaacttcagctgcagcagcagcagccaactcttaaaaggaacataaaacat
gattgggataaagaggatcaatataatgaaaatcctccaagaccacagccaagaggacct
cgaacacctccaggtcctcctcctcctgatgatgatgaggaggagacactgccacagacc
ttgggtccaaataaagtggatgaaagtgaacggagagaggattattttgaacccatctct
ccagatcgttcttccaatcaccaggaggtacagttaactgatgctgaagaagaggaagag
cctccagaggaggaaaaggaagatgaggaggaagatccagaagtagaagaggaagatgaa
gatcagcaaactgtagaaagcattgaagaagaggaaggtgatgtggaagaagaggcgagg
gaagaagttgatgaagatgatggctatgaacaaatctccagtgatgaagatggaattgca
gatttggaacgtgaaaattataaattaagctttgacattgattataccgctgaagatctg
gcatccgtgccgactatggcatatgatccttatgacagagacataggacctcttttatac
tttaatcctccctataggactaaatatgaaaatgaagttgctagattaaaggaacttgat
ttagacaatgtaggtgcagcaaatatagatgctgccgttaagttaaaggaactgcttgaa
ctatacaaagatgaccgaggtgctaaatgggtaatggctttagaagaggtgccaagttta
ctggttaagggtttaagttatgttcagctatttgaaagtgatcaggaccatctgaaacag
ctagtagactggaccatggatgctttaagcctgcatacagctgtaacacaacctatagca
ctgaatgtcaggcagctaaaagctgggacaaagcttgtttcatctttggctgaatgcggg
tctgagggagtttcagccctttcagcagcaggtattattgataaactctttgttctgttg
tttgcagaacatatgtcatcttctttaaaactaaatacgctcaaggctttggatagtttt
gttagtgtcacggagggaatggaaaaattcttgaacagtaagacagaagaacaaaaaagt
gggtatcagaggttagtggaacttatactgacggaccaaactgtgagagttgtgacagca
ggcagtgctatagtacagaaatgccatttttatgaggttttgtcagatttggaaaggata
gcttctcatcttgcagaaagtactcctgtcccttcaaacataagtgaagtagaccaagat
gttaatattgggcaagagaaaggaaataaaagtaacgaagaagtagatcttgagactcca
atggatttggaccatttgttagaagcttctaatataagtgaagtggaagtagaaaaaatt
gttagcattctcgatgaacttttgcatttgttggagactgcaccttattcaatgacccag
ccacctgttaagtcatttccaacagcagctcgcatcactggccctccagaaagggatgat
cctgtacctgctctgttaaggtatcttaacagctgccattttctggaatcactcactctg
ctcctgtctattcctgcaaccaatggtcatcctagtgtgttacagtctattaaagacctg
attaagttcctcattcagatacaaactggtcttttattcctcagtacagagtatgaagca
acgaatctactgatacgagccttgtctcagacttcagatcaagatcaggaggagggtatc
caatctgagaatagcaatgatgatgcattggctatatggcttttgtattcattacaggca
ttgcagtatgtttctgaactttttgactacttaaatcgaggtttagcagttgaggaaaca
gatcgtgcagatgtattaggaactcttcatagcctctatctgattacattcaatccaatc
gggcgaaatgctgtgtcccatgtgctccagctggataaaaatctttctagtctcattact
cttatggaatactattccaaagagctcttgggggacacaaagtccagaaaatctgttgca
tgcaattatgcctgcatgcttattttgcttacagtgcaatcaactcatgatgcacaaatg
ttggaacagcattctgctggattactgagactctgtaaggctgatgataccaatcccaaa
ctacaagaattgggtaaatggttggagccactaaagaacctcaagtttgaaattaattgt
attcctagtcttcttgaatatatcaaacagaatctggataatttgaccattcaaatgact
caggaaggtgccggactaaccactgcactgcgtgtcctttgccatattgcatgcccacct
cacccccttgaaggtcagcagaaagatcttaagtggaatcttgcaattattcagttgttt
tctgcagaaggcatggacatacttattcgaattctccaaaaactaaacagtgtcttaata
cttccctggagactgcatgcaaatatgggaactacattgcagaggattatgatcctttcc
attacaagatgcactctttcccttttgaaggctatgttgacagaacttctgagaggagga
tcttttgaatttaaggatgtacgagttcccacagtactggttacactccacatggtcctt
tgctctatacctctgtctgggcgactagacgatgaagagcaaaagattcagaatgacatt
gttgatattctacttacttttactcaaggagtaaatgagcaggttgcttattctgaggaa
tctttggcaaacaacacatggtcattaatgttaaaggaagtcctttcctttgtattgaaa
acaccagaaggatttttctctggaatgttgctgctttcagaactcttgccttttccactg
cccatgcaaaccacacagccaatttcatcagaaggtatagctattgcactgaatacccga
aaactgtggagcattcaccttcaaatacaagcaaagtttctgcaagaaatagtacgttcc
agctttggatccacctgtcaaactctgcaacagatacttaggcgtgtgtgcatacaacta
tgtgatctagcttctcctacagctcttcttatcctgaggactgtattggacctgattgta
gaagacttgagcagtcctttagaagggaaagagagggtctccactgcccagactgcacgt
ctgcttgcactgctggattctttggcttcacatggagcttgcaaggctgcccttttacac
cttttaagtggaaccagcaaaggtgatgagagatttgtggaggtctttcaagtgatgttg
gaattgctgcagacagcggtcgacaatgtacatcaccagcattgtgctgaatatattgct
tcttttgtgcagtccctctgtgaccaggacatttcactgatgttgacaaactcaactgag
ggacctggttctgacctggaacagctatccaattccctgccaaatggagaacttctatca
caaatatgtgacagtttcttgcaagcactagctaacagtgagaccacttataccacagta
cttacatgtctcaggaccatgatgtttttaacagaacatgaatatggctttttctattta
aagagtgctctgagacaaaataataatgctatccattgtctgctgaagcgtgtggtccat
aacttcaacaaagaaatggctgagctggcttcatcattgttggattttttgcgacagatc
ataaacacagatagcttgggcagttgtggagatgaaggtgctcctatggaaatagatggg
ttccaaactccccgttcttcagcactcagtgccgcagaagtgaagcagctcttaaaatgg
aaggaatctgcagatgatcatttgctgtttgaactcgacaaagttgttacggaactgtgt
aaagaggacgatagttttgactctttattagaaaatgttgttggattgcggcagatgtta
gaatcaactccagatgtattacctgtcactgcacaggatgtggagcctgttcttcctgtc
tccgaatcgcttccagtccagtttaacaacaggactgcatatgtgctggcagatgttctg
gatgaccaactaaagacgttatggctttccccattccaaactgaagagattgacacagac
atagatatggtcaaggttgacttgattgacctagctgagaagtactgctgtgatatggat
ctgaaggcagaactggaaagatcattcctttcagaaccttcgtctcctgctgcagccaag
gtaacaggaggttttaaactgggaaaacacaagcatgaaaccttcattacttccagtgga
aaatctgaatatatagagcctgccaaacgagcccatatagtgccaccgccccgaggtcga
ggcagagggggatttgggtcaaattgtagacctcatgatatatttcggcaacggaagcaa
aatacaagcagaccaccttcaatgcatgtagatgattttgtagcagcagaatgcaaagat
gttccttcctctggtccgcccccagcaaaaaggacaaataaaggacctcagaaagctcct
cgtggtggattttctggaaatagaggaggacgcggtgtctttcatagtcagaaccgtttc
ttttctccacctgctcccaaagaagatctaacttttcttccaggtcacgcagtaggactc
cttcatcctagcaccagaaatcaatttcatttgtgcggtggtatttcaagccctttttat
gcagcaaacagtctggatgaatggggaaattacagccgtcgtgaaggaggacgtggctca
agctggagtgtccagaatagtccccgtggtacatacagtgaaaatcgaggtggtcaaagc
aactttaacaaagggttgccatcaagacagccttcaacaggataccgtcaaagtcctcgt
gatcgtacatcaaggggtcgaggagcaggaccatcatggggaggaggcagttcaagagga
aagttcagtggaggaagtagcggaaggggtagacatgtacgatcctttacacgctga
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integrated database retrieval system
