Rhincodon typus (whale shark): 109933979
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Entry
109933979 CDS
T06055
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109933979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109933979
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109933979
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf_UBZ
Zn-ribbon_8
zf-LYAR
zf-met
zinc_ribbon_9
Zap1_zf1
zf-C2HE
zf-Di19
DUF2180
zf-RING_7
Motif
Other DBs
NCBI-GeneID:
109933979
NCBI-ProteinID:
XP_048475170
LinkDB
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Position
42:complement(7535695..7572214)
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AA seq
512 aa
AA seq
DB search
MEKPCKCVECGRGFRFPSRLDVHRRKHTGEKPFTCCKCEKGFARLSSLKIHQRRHAGEKS
FICITCGKWFANSSDLHVHQNVQTGEKPFTCSESGKGFAQFSKLCEHQRTHTGEKLFTCS
DCGKGFTKSSTLLRHQITHTGEKPFTCPECGKGFTQLTHLHQHQRAHTGEKPFTCPECGK
KFTQLVNLQSHQGTHTGEKPFPCPECGKRFTRLSNLHQHLGTHTGEKPFTCSECGKGFAQ
SSKLREHQRTHTGEKPFSCSVCGKGFARLSHVHQHQRTHTGEKPFSCTECGKRFTQLTNL
QSHQRTHTGEKPFTCPECGRGFAQFSNLHQHQTTHTGEKPFPCPECGKRFTRLSNLQQHH
RTHSREKPFTCSDCGKGFTKSSTLLRHQRTHTGEKPFTCRECGKVFAQLTNLQSHQRTHS
GNKQFPCSECGKKFTRLSNLHQHQRTHSRDKPCSEGFTESYKLREHQRSHTEEKPFSCPE
CKRSFTQLSHLHSHQRTHRKLRTARKGRSRLE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaccatgtaaatgtgtggagtgcggtaggggattcagatttccatccaggctg
gatgttcatcggcgcaaacacacaggagagaaaccatttacttgctgcaagtgtgagaag
ggatttgctcgtttatccagcttaaagatacaccagagacgtcacgctggggagaagtca
ttcatctgcataacatgtggtaagtggtttgctaattcatctgacttacatgtacaccag
aacgttcagactggggagaaaccattcacctgctccgagagtgggaagggatttgctcag
ttttccaaattatgtgagcaccagagaactcacactggagagaaactgttcacctgctct
gactgcgggaagggattcactaagtcatccactttacttcggcatcagataactcacact
ggagagaaaccgttcacctgccctgaatgtgggaagggattcactcagttaacacacttg
catcaacaccagagagctcacactggagaaaaaccattcacctgtcctgaatgcgggaag
aaattcactcagttagtcaacctacagtcacaccagggaacgcacactggggaaaaaccg
tttccctgtcctgagtgtgggaagagattcactcggttatccaacttacatcaacacctg
ggaactcacactggagaaaaaccattcacctgctctgagtgcgggaagggatttgctcag
tcttccaagttacgtgagcaccagagaactcacactggagagaaaccgttcagctgctct
gtctgtgggaagggattcgctcggttatcgcacgtgcatcaacaccagagaactcacact
ggagaaaaaccattcagctgtactgaatgcgggaagagattcactcagttaacgaactta
cagtcacaccagagaactcacaccggagagaaacctttcacctgccctgagtgcgggagg
ggattcgctcagttctccaacttgcatcaacaccagacaactcacaccggagaaaaacca
tttccctgccctgagtgcgggaagagattcactcgtttatccaacttacaacaacaccac
cgaactcacagtagggaaaaaccattcacctgctccgactgcgggaagggattcactaag
tcatccactttacttaggcaccagagaactcacactggagagaaaccattcacttgccgt
gagtgtgggaaggtattcgctcagttaacaaacttacagtcacatcagagaactcacagt
ggaaacaaacagttcccgtgttctgagtgtgggaaaaaattcactcggttatccaactta
catcaacaccagagaactcacagcagagataaaccctgctctgagggatttactgagtcg
tacaagttacgtgaacaccagcgatctcacactgaagagaaaccattctcctgtcctgag
tgcaagaggagtttcactcagttatctcacttacattcacaccagagaactcaccgtaag
ctgcgcactgccaggaaggggagatcacgtctggagtga
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