Rhincodon typus (whale shark): 109934549
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Entry
109934549 CDS
T06055
Name
(RefSeq) zinc finger protein 271-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109934549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109934549
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109934549
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
BolA
GAGA
zf-C2HC_2
Zn-ribbon_8
Motif
Other DBs
NCBI-GeneID:
109934549
NCBI-ProteinID:
XP_020388871
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Position
35:3496040..3516508
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AA seq
565 aa
AA seq
DB search
MSEVQNQAFIQWSMLMTDQRIRPGERTFTCEVCGKSFSQLGNLHTHQRTHTGEKPFTCEV
CDKSFSESSKLRAHQRIHTGEKPFTCEVCDKSFSHSSTLRKHRRIHTGEKPFMCKVCDKS
FSHSLTLRIHQRVHTGEKPFTCDVCDKSFLHSSNLRAHQRIHTGEKPFPCKVCDKSFSDS
STLRAHQRVHTGEKPFACEVCNKLFSDSSNLRKHQRIHTGEKPFACKVCDKSFSTSSTLR
THQRIHTGEKPFMCEICEKSFSQSSNLRTHECVHTEEKPFTCEMCDKSFPRSSKLLRHRR
MHTGEKLLTCEVCNKSFSDSSSLRVHQRVHTGEKPFTCEVCDQSFTQLSTLRSHRSIHTG
EKPFMCEVCSKSFSHSTTLREHHRIHTGEKPFKCEVCDKSFSRSSSLLGHQRVHTGEKPF
TCEVCDKSFAQSSTLHAHQRIHTGEKPFKCEVCNKSFSQLGSLMVHQKIHTGEKPFKCAV
CGKAFVRSSSLLIHQMIHTGEKPFRCEFCEIAFIQFSDLLRHQRIHTGEKPFKCEVCDRA
FTQSSTLVKHQRIHTDRESVLMQDV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagtgcagaaccaagcctttattcagtggtcaatgctcatgactgaccaacgt
attcgcccaggggagagaacattcacgtgcgaggtgtgtggcaaatcattctcacagtta
gggaacctccacacgcaccaacgcactcacacaggggagaaaccattcacatgtgaggta
tgtgacaaatcattttcggagtcatcaaaactccgtgcgcaccaacgcattcacacaggt
gagaaaccatttacatgtgaggtgtgtgataaatcattctcacactcatcgaccctccgc
aaacaccgacgtattcacactggagaaaaaccattcatgtgcaaggtgtgtgacaaatca
ttctctcattcattgacccttcgcatacaccaacgggttcacacaggagagaaaccgttc
acgtgtgacgtgtgtgataaatcattcttgcactcatctaacctccgtgcacaccagcgc
attcacacaggggagaaaccgttcccctgcaaagtgtgtgacaaatcattctcagactca
tccactctccgtgcacaccaacgtgttcacacgggagagaaaccattcgcatgcgaagtg
tgcaacaaattattctcagactcatcaaacctccgcaaacatcagcggattcacacaggg
gagaagccattcgcgtgcaaggtgtgcgacaaatcattctcgacttcatccacacttcgc
acacatcaacgtattcacacaggggagaaaccattcatgtgtgagatatgtgaaaaatca
ttctcgcagtcgtcgaaccttcgcacacacgaatgtgtgcatacagaagagaaaccattt
acctgtgagatgtgtgataaatcattcccgaggtcatcaaagctcctgagacacagacgg
atgcatacgggagagaaattattaacatgtgaagtgtgcaacaaatcattctcagactct
tcttccctccgtgtacaccaacgtgttcacactggggagaaaccgttcacatgcgaagtg
tgtgaccagtcctttacacagttatcaacgcttcgctcacatcgtagcattcacacaggt
gagaaaccattcatgtgtgaggtctgcagtaaatcattctcacattcaacgaccctacgt
gaacaccaccgtattcacacaggggagaaaccgttcaagtgtgaggtgtgtgacaagtca
ttctcgaggtcatcatctctccttggacaccaacgtgttcacactggggagaaaccattc
acgtgcgaagtgtgtgacaaatcatttgcgcagtcatccaccctccacgcacaccaacgc
attcacacaggagagaagccattcaagtgtgaggtgtgcaataaatccttttcacagtta
ggaagcctcatggtgcatcagaagatccacacaggggagaaacctttcaagtgcgcagtt
tgtggtaaagcttttgtgagatcttcaagcctcctgatacaccagatgattcacactgga
gaaaaacctttccgatgtgaattttgtgaaatagctttcatccaattctccgatctcctg
aggcaccagagaattcacacaggagagaaaccctttaaatgtgaggtttgtgaccgagcc
tttacacagtcctcgacacttgtgaaacatcaacgcattcacacagatagggaatctgtt
ctcatgcaagacgtgtga
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