Rhincodon typus (whale shark): 109938716
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Entry
109938716 CDS
T06055
Name
(RefSeq) polyamine-modulated factor 1-binding protein 1
Organism
rtp
Rhincodon typus (whale shark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
Crescentin
Filament
Tropomyosin
DUF5503
Motif
Other DBs
NCBI-GeneID:
109938716
NCBI-ProteinID:
XP_048461923
LinkDB
All DBs
Position
15:23361800..23511005
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AA seq
1014 aa
AA seq
DB search
MSVVKAKKQENHCQEKSMEQLQKELEVFKQAHESDIDHFSHETAQLQKELDSSTKELQEK
LTKLQQYKSTVDRLNSDLQHAHQQHQEVVQEVSQCEGIMRKQESEIAHLKQQQFDSENQI
AAANQNCKSLEAMLDLYKQKYQTCINKITELENSMQSLEADLQDANRQLCNRDETVHKLR
NDMLTVQHQYETKCRQMEHCEDSIDQLTHQLQIAQEGLSANREHVTQCEEIIRSLQEQAT
LFSFQATEWEESLVKLQTDFASYKATHSHSDTDYDLQTAQLEQLKKDLAQVNAQSSEFAQ
EIHNYQAMIHKMNAQLTTVTEQKNDRIKDVARLEKVVQSLQLDIASELQKHQKESAKLGQ
QIIQLENDLRNSRKLYNQREQAIQKRDDLLRKSETDLLQARDSIKGKVTEIEKQGAVVKG
LEMDLQRLEKEKQHKENENISLKAEIEQLNQDLQNSNKNCREFAQELAHHEEKLLLMGRS
LQTAQDQLGDRVTEIVRHEQANRKLQSELKILKERETSNKEEINAYRVQIEELKAENAQN
KQSYETAATEGLKYQQLICKMEMEVNTSKEQIKMLQAQIHQKEGESNRLREELKLEQMRQ
EELQKQSQKLKEQVGELKKETDELNAKFKDNTQMLKEKEDHILSLEDHLTQFQKKHQALL
NEYRNCESELQVAQTNLSTAQKQNKYYTEEATQQEDKFTKLQSELNTVQEQARKTNHELK
SADQLIRELKRELTACHGTQKENMEQLSQKSREIASLRNDVARSQQRNMQLAEESAAYEE
RMRRLHDELKKMQSLNRRAEEEAHICENRLMELSNQMIMSQGKSHETMKELTSKEEELLI
MRVELVSLREKYHSKTEELLILPPATRKIVVDNSQHPSPSRYLATFAPLGTQQQLLKLET
LRKSLHGARSDSSRLHRESELVVANVNQWVKDQKQANEKLGNKIKEQTKQILQLTAEKDH
LQEMNERLQHENKKLKVEVDEKRIANERLKALHSHPGEHPNVMRQIRSPFQDEE
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtgaaagctaagaaacaagaaaatcactgtcaggagaaatccatggagcag
cttcagaaagaacttgaagtattcaaacaggctcatgaatctgacatagaccattttagt
catgaaactgctcaactacagaaggaacttgactcgtctacaaaggaattacaggagaag
ttgaccaaactgcaacagtacaagtccacagttgacagactgaattctgacctacaacat
gcacatcagcaacatcaagaggtggtccaagaagtttctcagtgtgaaggcattatgcgc
aaacaagaatcggaaatagctcatcttaaacagcagcagttcgactctgagaaccaaata
gccgcagccaatcagaattgcaaatcacttgaagctatgttggatctttataagcaaaag
taccagacttgtataaacaagatcacagagctggaaaattcaatgcaaagcctggaggca
gatttacaagatgcaaatagacagctttgcaaccgtgatgagactgtccacaagcttcgg
aatgatatgctcacggtgcaacaccagtatgaaacaaagtgtaggcaaatggaacattgt
gaggacagtattgatcagctgacccatcagttacagattgcacaagaaggtctatctgca
aacagagaacatgttacccagtgtgaggagattattcgtagcctccaagagcaagccacg
ctattttcattccaggctactgaatgggaagagtcacttgtaaaactccaaacagatttt
gcttcctacaaagccacacacagccattctgatacagattacgatctccagactgctcaa
cttgaacaattaaagaaagatcttgcacaagtcaatgctcagagttctgagtttgcacag
gaaatccataattatcaggcaatgatacacaagatgaatgcacagttaaccactgttaca
gaacaaaagaatgataggattaaagatgtagcccgcttagagaaagttgtccaaagtctt
caacttgatatagcctctgagttgcaaaaacaccaaaaggagtcagccaaactgggacag
cagatcattcaactggaaaatgacctacgcaacagtcgaaaactatacaaccaacgagag
caggcaatacagaagagagatgacctcttgaggaaatctgaaacagacctgcttcaggct
cgtgatagtatcaaagggaaggtaacagaaattgaaaagcaaggcgctgtggtgaaaggc
ctagagatggatcttcagagactggaaaaagaaaagcagcacaaagaaaatgaaaacata
tccctgaaggccgagatagaacagttgaaccaggatctacaaaacagcaacaaaaactgc
agagaatttgcacaggagctggcacaccatgaggagaaacttttactgatggggagaagt
ctgcaaacagcacaggatcagctcggtgatcgtgtcacagaaattgtccggcatgaacag
gcaaatcgtaaactacaatcagagcttaaaattctgaaagaacgggaaactagcaacaaa
gaagagatcaatgcttacagagtacagattgaagaactcaaagctgaaaatgctcagaat
aaacagagttacgaaactgcagccacagaaggactcaagtaccagcaattaatttgcaag
atggaaatggaagtcaacaccagcaaagagcagattaaaatgctacaagcacagattcac
caaaaagaaggtgagagcaacagacttcgagaagaattaaaattggaacaaatgagacaa
gaagaattacaaaagcagtctcagaaactgaaagaacaagtaggagagctcaaaaaagaa
actgatgaattgaatgccaagtttaaagataatacccagatgctgaaggagaaggaggat
catattttaagtctggaagatcatttaacccagttccagaaaaagcaccaagctttactt
aacgaatacagaaactgtgaatcagagttacaggtggcccaaacaaatctttcaacagct
cagaaacagaacaagtattatactgaagaggcaactcaacaagaagataaatttaccaag
cttcagtcagagctgaatacagtccaggagcaggcaagaaaaactaaccatgaactgaaa
tcagcagaccaactcatccgtgaactcaaacgagagttaacagcttgtcatggtacccaa
aaagaaaatatggagcagctaagtcagaagagccgagagatagccagcctgagaaatgat
gttgcacgaagtcaacagagaaatatgcagttagcagaggaaagtgcagcatatgaggaa
aggatgagaagactgcatgatgaactgaaaaaaatgcaatcactgaatcgacgagcagaa
gaagaagctcacatttgtgagaatcgattgatggaactaagtaaccagatgataatgtca
caggggaaatcccatgaaaccatgaaggaacttaccagtaaggaagaagagttactgata
atgagggtagaactggtctcccttcgagaaaaataccactctaaaactgaagagcttctt
attctaccacctgccacaaggaaaatagtcgttgacaattcccaacatccaagtccgagc
aggtacctagcgacattcgctcctctgggcactcagcaacaacttctcaagcttgagacc
ttacgaaagtctctgcatggtgcaaggtcagacagttcaagattacatcgagaaagtgaa
ctggttgtagcgaatgttaatcagtgggtaaaggaccaaaaacaagccaatgaaaaactt
ggaaataagatcaaagagcaaacaaagcaaatccttcaactaacagctgaaaaagaccat
ctacaggaaatgaatgaacgactacagcatgagaataagaaattaaaagttgaagtggat
gagaagagaatagcaaacgagaggctaaaggctttgcacagtcatccaggtgagcatcct
aatgtcatgcgtcaaatccggagcccatttcaagatgaagagtaa
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