Rhizobium tropici: RTCIAT899_CH04520
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Entry
RTCIAT899_CH04520 CDS
T02432
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00550
Peptidoglycan biosynthesis
rtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RTCIAT899_CH04520
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtr01002
]
RTCIAT899_CH04520
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rtr01011
]
RTCIAT899_CH04520
Enzymes [BR:
rtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RTCIAT899_CH04520
Peptidases and inhibitors [BR:
rtr01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
RTCIAT899_CH04520
Peptidoglycan biosynthesis and degradation proteins [BR:
rtr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RTCIAT899_CH04520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
DUF1381
SLD3
Motif
Other DBs
NCBI-ProteinID:
AGB70316
LinkDB
All DBs
Position
934555..935892
Genome browser
AA seq
445 aa
AA seq
DB search
MSAFFRLGTIMKRLLMALSAAVLLLSAPVASFAGSAYFIMDAKTGNVLASSNADDLNHPA
SLTKMMTLYMTFEAIHRGKLSWNTRIPVSRFASAKPPTKLGLKPGGTVTVREAVDGMIIK
SANDAATAMAEALGGSESGFARMMTQKARELGMRRTTFLNASGLPNMQQWTTARDMSTLA
VALINNYPQEYRLFSQTSFNYRGHYVRGHNNLMYRYEGMDGIKTGYTNASGFNLVSAVRQ
GNRRVIGVVMGGATARGRDAMMASLLDRYVPKAAPAATSRLMASVGGGKMAKQVEVASAS
DDVAVDVDTQTTAATPRKRAEVVPMAFAAASNVTVPMDRPAAMDEILVDNKQTATASKPV
VSGSWQVQIAATPTAQAAKDLLSEAKSKAGNALANASPYTEAVGKGASTVYRARFTGFAS
RDDASSACSALKRKDFDCMLLPSKG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcattctttcggttggggacaattatgaaacgacttctgatggctttgtctgcg
gccgtcttgctgttgagcgctcccgtggcgagcttcgctggcagcgcctatttcatcatg
gatgcaaagaccggcaacgtgctggcatccagcaatgcggatgacctcaaccatccggca
tcgctgaccaagatgatgacgctgtacatgaccttcgaggcgatccatcgcggcaagctg
agctggaataccaggatcccggtttcgcgtttcgcctctgccaagccgcccaccaagttg
ggtctcaagcccggtggtacggtgaccgtccgcgaagccgtcgatggcatgatcatcaag
tctgccaacgatgccgccaccgccatggcggaagcgcttggcggcagcgaaagcggcttt
gcgcggatgatgacgcagaaggcgcgcgaactcggcatgcgccgcaccaccttcctgaat
gcctcgggccttccgaacatgcagcagtggacgacagcgcgagatatgtcgacgcttgcc
gtcgcgctcatcaacaactatccccaggaataccggctcttctcgcagacgagctttaac
taccgcggccattacgtgcgcggccataacaatctgatgtatcgctatgaaggcatggac
ggtatcaagaccggctataccaatgcctccggcttcaacctcgtcagcgccgtgcgccag
ggcaatcgccgcgtgatcggcgtcgtcatgggcggcgctaccgcgcgtggccgcgatgcg
atgatggcgtcgctgctggaccgctatgtgcccaaggcagcccccgccgcgacatcgcgc
ctgatggcgagcgtcggcggtggcaagatggccaagcaggtcgaagtggcgtctgcatcg
gacgatgttgccgtggatgtcgatacgcagaccaccgcagccaccccgcgcaaacgcgcg
gaggtcgttccgatggcattcgctgccgcctcgaacgtcaccgtgcccatggatcgcccg
gctgcgatggacgagatcctggtcgataacaagcagacggcaaccgccagcaagccggtc
gtatccggaagctggcaggtgcagatcgccgcgacgccgaccgcccaggctgcaaaggat
cttctctcggaagcgaagtccaaggccggcaatgcgctcgccaatgcctcgccctatacc
gaggccgtcggcaagggtgccagcacggtctatcgcgcccgcttcaccggctttgcaagc
cgtgacgatgcgagttcggcttgctccgctttgaagcggaaggacttcgattgcatgctg
ctaccaagcaagggctga
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