Rhizobium tropici: RTCIAT899_CH14505
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Entry
RTCIAT899_CH14505 CDS
T02432
Name
(GenBank) putative IS630 family transposase, OrfC
Organism
rtr
Rhizobium tropici
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Gene cluster
GFIT
Motif
Pfam:
DDE_3
PAX
HTH_32
HTH_Tnp_IS630
HTH_Tnp_Tc3_2
HTH_21
DUF3045
HTH_23
Thymopoietin
Motif
Other DBs
NCBI-ProteinID:
AGB72276
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Position
2917900..2918847
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AA seq
315 aa
AA seq
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MTRPYSNDLRERVVAAVVSGQSCRVVGERFDIAVSFVVKWSQRHRATGSVSPGKMGGHRR
RVLEPHRTFIVEQIEQTSHLTLHRLKDELAARGVAVSHNPIWQFMRREGLSFKKTLFALE
QGRADIARRRARWKAWQGRFDPTRLVFIDETWIRTNMAPLRGWGPKGKRLRGFAPHGRWR
TLTFLGALRCDKLTAPCVFDGPINGECFGAYIRQQLIPTLKPGDIVILDNLGSHKAKAIR
DAIRAAGARLWFLPKYSPDLNPIEQAFAKIKHWMRQAQKRTVEDTWRHLGYLTDTIKPDE
CANYFSNAGYASVKT
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaccctattcgaatgatcttcgtgagcgagtcgttgctgcggttgtgagtgga
cagagctgccgggtggtgggggagcggttcgacatagctgtgtcgtttgtggtgaagtgg
tcgcagcgccatcgggcgaccggcagtgtgtcgcccggcaagatgggcggccatcgtcgg
cgggtgctggagccgcaccgcacctttatcgtcgagcagatcgaacagacatcccatctg
acactgcatcggctgaaggatgagttggccgcccgcggcgtggccgtctcccataatccc
atctggcagttcatgcgtcgcgaaggcctgagctttaaaaaaacgctgttcgcccttgag
cagggtcgcgccgacattgcccggcgcagagcgcgctggaaagcctggcagggtcgcttc
gacccgacgcggctcgtctttattgatgaaacctggatcagaaccaacatggcaccattg
cgcggctgggggccgaaaggcaaaaggctgcgtggctttgcaccccatggccgctggcgc
acgctcactttcctcggcgccttgcgctgcgacaagctgaccgcgccctgcgtcttcgat
ggtcccatcaatggcgaatgtttcggcgcctatatccgacaacaactgatcccgaccctc
aagcccggcgacatcgtcatccttgacaatctcggctcacacaaggccaaggccattcgc
gatgccatcagggcggccggcgcaaggctgtggttcctgccgaaatactcccccgacctc
aatccgatcgagcaggccttcgcaaagatcaaacactggatgcgccaggctcaaaagcga
accgtcgaggacacctggcgccatctcggatatctcaccgacaccatcaagccggacgaa
tgcgccaactacttctcaaacgcaggatacgcttccgtcaaaacttga
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