Rhizobium tropici: RTCIAT899_PB02175
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Entry
RTCIAT899_PB02175 CDS
T02432
Name
(GenBank) transcriptional regulator, XRE family
KO
K07110
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
rtr
Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtr03000
]
RTCIAT899_PB02175
Transcription factors [BR:
rtr03000
]
Prokaryotic type
Helix-turn-helix
XRE family
RTCIAT899_PB02175
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_31
HTH_3
HTH_19
HTH_25
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AGB73681
LinkDB
All DBs
Position
pRtrCIAT899b:403109..404506
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AA seq
465 aa
AA seq
DB search
MEKLCVYLGPRLRRLRKNLGLTQADMASDLDVSPSYVALMEGNQRPVTAEILLRLAKIYK
LDMSLFADDGTPEILARLQSTMKDPIFSGIEISPLEVADVLSSFPGFAEAMLRLYTSYKE
EQIVLADQRQAALDGGIDEGADPVAGVRRFLAARRNCFPGLDVAAEKLAAAVKEAGGLPF
YLMQRHNLRVRRLPTEIMSGSVRRLDRHRHEVLLDDCLDLASQNFQLAQQLAYLESEGDI
QKFVQEGNLATESGRRLAYRALAGYFAAAVVMPYTQFAKAVEARRYDVEALSRQFGTSFE
QTAHRLTTLQKPGQERIPFFFIRVDSAGNVSKRLDSANFPFARHGGGCPLWTLHQVFTTP
RTVVTQWLELPDGQLFFSIARTVSSGGGAFGLPRVDRAVALVCEASHVERLVYHKDNTSV
VPTPIGITCRLCQRDSCTSRSEPPIGRQILPDHYRRTDAPFGFSD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactctgcgtttatctcggtccgcgacttcgacgcttgcggaaaaatcttggc
ctcactcaagccgacatggcatctgacctcgatgtctccccttcttatgtcgcgctcatg
gaggggaatcagcgaccagttacggccgagattcttctgcgacttgcgaagatctacaag
ctcgacatgtcgctctttgccgacgacggcacgcccgaaatccttgcgcgactacaatcg
accatgaaggatccaatattcagtggcatagagatatcaccgctcgaagtcgcagacgtg
ctcagcagctttccggggtttgcagaagcgatgctgcggctctacacctcgtacaaggag
gaacagattgttcttgccgatcaacgacaggccgccctcgacggagggatcgatgaagga
gcagatcctgttgcgggcgtgcgacggttcctcgcagctcgacgtaattgctttcctggc
cttgatgttgcggcagaaaagttggcggcggcggtgaaggaggctggcgggcttccattc
tatcttatgcaacgtcacaatcttcgagtgagacgattaccaacggagatcatgtcagga
tcggtccgccgactggaccgacacaggcatgaggttctacttgacgactgcttggatctg
gcaagccaaaactttcaacttgcacagcaactcgcctatcttgaatccgagggcgatatt
caaaagttcgttcaagaaggcaatcttgcgacagagagtgggcgacgattagcgtaccgg
gcgctcgcaggctactttgcagcagccgttgtcatgccctacacgcaatttgccaaagcg
gttgaagcgcgccgctatgatgtcgaagcgctctcgcgtcaatttggcaccagtttcgaa
cagacggcacatcggctgaccacactgcagaagcccggacaagagcggatccccttcttc
tttatccgtgtggattctgcaggcaacgtgtccaagcgcctcgacagcgcaaattttccc
ttcgcacgacatggcggtggttgccccctttggacgttgcaccaggtttttacaacgccg
aggacggtggtaacgcagtggctagagttgccggatggccaactatttttttcgatcgct
cgaaccgtaagttccgggggaggtgcctttggacttccgcgcgtcgatcgggccgtggcg
ctggtttgcgaagccagccacgtcgaacgtctggtctatcataaggacaacacgtccgtt
gtgccaacgcccatcggcattacctgtcgtctttgccaacgcgatagctgcacatcccgg
tcggaaccgccaatcggccgacagatcttgcctgatcactaccggcgcacggacgcgcca
tttgggttttccgactga
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