Rufibacter sp. DG15C: TH61_04520
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Entry
TH61_04520 CDS
T04326
Name
(GenBank) 2-oxoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rud
Rufibacter sp. DG15C
Pathway
rud00020
Citrate cycle (TCA cycle)
rud00785
Lipoic acid metabolism
rud01100
Metabolic pathways
rud01110
Biosynthesis of secondary metabolites
rud01120
Microbial metabolism in diverse environments
rud01200
Carbon metabolism
rud01210
2-Oxocarboxylic acid metabolism
Module
rud_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rud_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TH61_04520
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
TH61_04520
Enzymes [BR:
rud01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
TH61_04520
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AMM50590
UniProt:
A0A127AZM2
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Position
complement(1085586..1088339)
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AA seq
917 aa
AA seq
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MDKYSYIANAHGTYIDELYKQFQQDPESVEFGWRKFFEGYEFSDNYPGENGTSAPATTQG
QPAGASATAVDKEIQVRNLIHAYRSRAHLRAKTNPVRPRKDRKARLDIQEFGLSEADLDT
SFQSGAELGLGNAKLRDIINALQTIYERTIGFEFMYIRDPEVLEWFKTKVEKESLAFNPS
IEYKKRILSKLNEAVVFENFLHTKFLGQKRFSLEGGETTIPALDAIIDKGAELGVQEVVI
GMAHRGRLNVLANIMGKTYEQIFSEFEGTAVPDLTMGDGDVKYHMGYSSEVETPSGHKVN
LKLAPNPSHLEAVNPVVEGFVRAKIDTMYGKDSSKILPILIHGDAAVAGQGIGYELIQMA
QLEGYGTGGTVHFVINNQVGFTTDFEDARSSIYSTDLAKVVDAPVLHVNGDDPEAVVFAV
RLATEYRQKFKNDIFIDMVCYRRHGHNEADEPKFTQPQLYNLISKHQNPREIYNKTLVSR
GDVDAQVAEEMDKQFRNMLQDRLDMVKQKPLPYNYQNLEKEWQELRRSTPEDFDQSPETG
ISIEAIEQVGKALTTLPENFKPLKQIEKLTKERQDMFFNARSLNWASAELLAYGSILLEG
KIVRMSGQDVQRGTFSHRHAVLHDANTSAAYTNLNHIAEGQQQLHIYNSLLSEYGVLGYE
FGYAMANPNALVIWEAQFGDFANGAQVMIDQFISSTESKWQRMNGVVMLLPHGYEGQGPE
HSNARPERFLQLAAEYNMYVTACTTPANFFHMLRRQLATPFRKPCIHMSPKSMLRHQAVM
SPIEDFTQGSFQEVIGDGFVDAAAVTKVLLCSGKVYYDLLEEQQKTGRTDVAIIRLEQLH
PFPKVQLQAELAKYPNAQVYWVQEEPYNMGAWTYILSVMRNEVVDVVSRKSSSSPATGYN
KVHQKEQRAIVEKAFAI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggataaatactcttatatcgctaatgcccacgggacttatatagatgagctctataag
cagttccagcaggatccagaatcagttgagtttggatggcgaaagttttttgaaggctac
gagttctctgacaattatccgggagaaaacggaacatctgccccagcgaccacgcaaggt
caacctgccggtgcctctgccacggcggtagacaaagaaattcaggttcgcaacctaata
catgcgtaccgttcccgcgcgcacctaagagccaaaaccaatccggtacgcccaagaaaa
gacagaaaagccagattagacattcaagagtttggactttctgaggctgacttagatacg
tctttccaatctggggccgagcttggcttaggcaatgccaaactgcgtgacattatcaac
gccttgcaaactatctatgagcgcaccatcgggtttgagttcatgtacatccgggaccca
gaggtactggagtggttcaagaccaaggtggagaaagagtctctggcattcaacccatcc
atagaatacaaaaagcgcatcctttctaagctgaacgaagctgttgtctttgagaacttc
ttgcatactaagttcttagggcagaagcgcttctctctagagggtggcgagaccaccatc
ccagccttggatgccatcattgacaaaggcgccgaactgggcgtgcaggaagtggtgatt
ggcatggcgcaccgcgggcgtttgaacgtgctcgccaacatcatgggcaaaacctatgag
cagattttctctgagtttgagggaacggctgttccagacttgaccatgggcgacggagac
gtgaaataccacatgggttactctagtgaggtagagacgccgtctggccacaaagtgaac
ttgaaactggctcccaacccctcgcacttagaggcggtgaacccagtggtagaaggcttt
gtacgggccaagattgataccatgtatggcaaagactccagcaaaattcttcctatctta
atacacggtgatgcggccgtagctggtcaaggcattggctatgagcttatccagatggcc
cagctggaaggctacggcactggtggtacggtgcatttcgtgattaacaaccaggtgggt
ttcaccactgactttgaggacgcccgttcttctatctacagcacagacctagccaaggta
gtagacgcgccagtattgcacgtgaacggggacgacccagaagccgtggtatttgccgta
cgcctggctactgagtatcgtcagaaattcaagaacgacatcttcattgatatggtgtgc
taccgccgccatggacacaatgaggcagatgagcctaagttcacccagccgcagctatac
aacctgatttctaagcaccagaacccgcgcgagatttacaacaaaaccttggtgagccgt
ggtgatgtagacgcacaggtagccgaagagatggacaagcagttcaggaacatgctgcaa
gaccgtctggacatggtcaagcagaagccattgccgtacaactaccagaacctggagaaa
gaatggcaagagcttcgccgctccacgccagaggattttgaccagtcgcctgagaccggt
atttccatcgaagccattgagcaagtaggaaaagccttaactacgcttccagaaaacttc
aaaccgctcaagcagattgagaaattgaccaaagagcgccaagacatgttcttcaatgcc
cgctctttgaactgggcctctgctgaactattggcttacgggtctatcttgctagaagga
aagattgtgcgtatgtctggacaggacgtgcaacgcggtacgttctcgcaccgtcatgcg
gtgttgcatgatgccaacaccagcgctgcttataccaacttaaaccacattgccgaaggc
caacaacaactgcatatctacaactccctgctttctgagtatggcgtgctagggtatgag
tttggctacgcgatggccaaccccaatgccttggtgatttgggaagcccagttcggggat
ttcgccaacggcgcgcaggtcatgattgaccagttcatctcttccacagagtctaagtgg
cagcgtatgaacggcgtagtgatgctgctgccgcatggctatgagggccagggtccggag
cactccaacgcccgcccagagcgcttcttgcagttagccgctgagtacaacatgtacgtg
accgcctgtaccacgccggctaacttcttccatatgctgcgccgccagttggctacgccg
tttaggaagccgtgtatccatatgtcgcctaagtctatgctgcgtcaccaagcggtgatg
tctcctattgaagacttcacgcaaggctcgttccaggaagtgattggcgacggttttgta
gacgctgccgcggtgaccaaagtgttgctgtgctctggcaaggtgtactatgacctgttg
gaagaacaacaaaaaacaggtcgtacagacgtggccattatccgtttggagcagttgcat
ccgttccctaaagtgcagttgcaggctgagctggccaaatacccgaacgcccaagtatac
tgggtacaggaagagccatataatatgggtgcctggacgtacatcttgagcgtgatgcgc
aatgaggtggtagacgtggtttcacgtaaatcaagctcatcgccggccactgggtacaac
aaggtgcaccagaaagagcaacgcgccatagttgaaaaagcatttgcaatataa
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