Rufibacter sp. DG15C: TH61_16540
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Entry
TH61_16540 CDS
T04326
Name
(GenBank) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
rud
Rufibacter sp. DG15C
Pathway
rud00500
Starch and sucrose metabolism
rud01100
Metabolic pathways
rud01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rud00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
TH61_16540
Enzymes [BR:
rud01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
TH61_16540
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
DUF3459
Motif
Other DBs
NCBI-ProteinID:
AMM52471
UniProt:
A0A127B4W7
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Position
complement(3845074..3846642)
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AA seq
522 aa
AA seq
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MKKQPINYFLAAIAVALCVAGSSVTSFAQSNKASKWPRGITYEIFVQSFADSNGDGIGDI
KGMTSKLDYLKDLGVEGVWLMPINPSPSYHKYDVTDYYGIHPDYGTMADFKEFVKEAHER
GINVVMDMVINHSSDKHPWFIDAAKNENSPYRDYYVWTHKSDPQAQKEGKPTGADSDNTR
HWHKVNGSDYLYYGYFYSGMPDLNFDSPKLRNEIFKIGTFWLKEIGVDGFRLDAARHIFP
DERPYDNHRWWEYFRSEMLKAKPDAYLVGEVWAPSDIVAPYMKGLPALFNFEMSWDILKA
LNQGKGDSLAIKHAKITNFYNSVNPEFIDATILSNHDQNRIMSELNGDKNKAKVAASILL
TLPGSPYLYYGEELGMTGKKPDPNIREPFLWDIDSKDKSRTKWMKPAYVTEKTVTPAAGQ
IKDKNSLFNHYKQFIKLRNHSHALTYGDLVPVTLSEPALSAFTRTHAQEALLVVHNLSGK
EVSVILPENVQAFNKVHHATGKAKLNKNTLTIPAYSSVLLKK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaacctattaactattttctagctgctatagccgtagccctttgtgtagcg
ggttctagtgtcacaagctttgcccaatccaataaagccagcaaatggcctagaggtatc
acctatgaaatcttcgtgcagtccttcgccgattcaaatggagatggcattggtgacatc
aaaggcatgacctctaagctggactatctgaaagacctgggcgtggaaggcgtgtggctc
atgcccatcaacccatcgccgtcttaccacaagtatgacgtcacagactactatggcatt
catccagattatggtaccatggcagactttaaagagtttgtgaaggaagcccatgagcga
ggaatcaatgtggtgatggacatggtcatcaaccattcctctgataaacatccatggttt
attgacgcagcaaagaatgagaacagtccctaccgggattattacgtttggacccacaaa
tcagaccctcaggctcaaaaggaaggaaaacccactggagcagattcagacaacacccgc
cactggcacaaagtaaatggcagtgactatctatattatggctacttctacagtggcatg
ccagacttgaattttgatagccccaagctgcgtaatgagattttcaagattggtactttc
tggttgaaggaaattggcgtagatggattcagattagatgcggcccgccatatcttccca
gatgagcgtccctatgacaaccaccgctggtgggaatattttagaagtgaaatgctgaaa
gccaaaccagacgcctatctggtaggtgaggtgtgggcgccttctgacattgtggcacct
tatatgaagggtttgccagccttgttcaactttgaaatgagctgggacatcctgaaagcc
ttgaaccaaggcaaaggtgattcattggccatcaagcatgctaaaatcactaatttctat
aactcagtaaaccctgagtttattgatgccaccatcttgagcaatcatgatcagaaccgc
atcatgagcgaactgaatggggataagaacaaagcaaaagttgcggcgtccattttatta
accctaccaggttccccttatttgtattatggcgaagaactaggtatgactggtaaaaag
cccgaccctaatattagagagcctttcttatgggatattgattccaaagacaaaagccgc
actaagtggatgaagccagcctatgtcacagagaaaacagttacgccggctgctggtcaa
atcaaagacaagaactccttatttaaccattacaagcagttcatcaaactaagaaaccat
agccatgccttgacttacggcgacttggtaccagtaaccttgagcgagcctgcattaagc
gcatttaccagaacccatgcacaagaagccttattggtggtgcacaacttgtcaggcaaa
gaagtttctgtcatccttccagagaatgtgcaggcctttaataaggtgcaccatgctacc
ggtaaggcaaaattaaacaagaatactctcaccattccagcttacagcagcgtgttgctg
aagaagtaa
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