KEGG   Rufibacter radiotolerans: TH63_14380
Entry
TH63_14380        CDS       T03996                                 
Name
(GenBank) ribonuclease
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
ruf  Rufibacter radiotolerans
Pathway
ruf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ruf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TH63_14380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ruf03019]
    TH63_14380
Messenger RNA biogenesis [BR:ruf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     TH63_14380
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH DUF4954 DUF4407 SNARE_assoc UPF0154
Other DBs
NCBI-ProteinID: AKQ46548
UniProt: A0A0H4VMH8
LinkDB
Position
3520053..3521645
AA seq 530 aa
MTIYIILAALVGAGIGFYAGRVMLLKLFKEQEHQATERAKLIIREAEAKAESQKKDKMLE
AKEHFLKLKAEYEEEANRKKNIIIQNENKVKQREQFITKQQEDLKKKEQETDVLKDKLNQ
QLEGFNKRKEDLEAQFRDKQAKVEKDHHEILSRLERIANLSADEAREQLVENLKSEASTR
ASSYIKDIVAEAKLTATKEAKKVVIETIQRTAAEHAIENCVSIFNIESDDIKGKIIGREG
RNIRALEAATGVEIIVDDTPEAIIISGFDPVRREIARLSLHRLVADGRIHPARIEEVVAK
TKKSIDDEIVEIGERTAIDLGIHGLHPELIRMVGRMRFRSSYGQNLLQHSREVANLCATM
AAELGLNVKHAKRAGLLHDIGKVTTEEPELPHAIIGMQLAQQYKEHPDVCNAIGAHHDEI
EMTAMISPIIQSCDAISGSRPGARREIMESYIKRLKELEETAHSFEGVNQCYAIQAGREL
RVMVDADNVTDERASQLSFDISQKIEKEMQYPGQIKITVIREMRSVSYAK
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgactatttatatcattttagcagcgctggtgggcgcgggcatcggcttttatgccggc
cgcgtcatgcttctgaagctcttcaaggagcaggagcaccaagccaccgaacgcgccaaa
ctcatcatccgcgaagcggaagccaaagccgaaagccagaagaaagacaagatgctggaa
gccaaggagcatttcctgaagctcaaagccgagtacgaggaagaggccaaccgcaagaaa
aacatcatcatccagaatgagaacaaggtaaagcagcgcgagcagttcattaccaagcag
caggaagacctcaagaaaaaagagcaggaaaccgacgttctcaaagacaaactcaaccag
cagctggaaggcttcaataaacgcaaagaagacctggaagcccagttccgcgacaagcaa
gccaaggttgagaaagaccaccacgagattctgagccgcctggagcgcattgccaacctg
tctgccgacgaagcccgcgagcaattggtagaaaacctgaagtctgaagcctctacccgc
gcctcttcttacatcaaagacattgtggccgaggccaagctcaccgctaccaaagaagcc
aaaaaggtagtgattgagaccattcagcgcaccgccgccgagcacgccattgagaactgc
gtgtctatcttcaacattgagtctgatgacattaagggcaagatcattggtcgtgagggc
cggaacatccgggcactggaagctgctaccggtgtagagatcattgtagacgacacgcct
gaggcgattatcatctctggctttgacccggtacgccgcgagattgcccgcctttcgctg
caccgcctggtagccgacggacgcattcacccggctcgtattgaggaagtggtggccaag
accaagaaaagcattgacgacgagattgtggagattggcgaacgtaccgccattgacctg
ggcatacatggcctgcaccccgaactgatcagaatggtgggccgcatgcgctttagatca
tcctacggccagaacctgctgcagcactccagagaagtagcgaacctttgcgccaccatg
gccgctgaattaggcctaaacgtgaaacacgccaaacgcgccggtctgttacacgatatt
ggaaaagtaaccactgaggagccggaattaccgcacgctattattggtatgcagctggcc
cagcagtacaaagagcacccagatgtgtgtaacgccattggcgctcaccatgatgagatt
gagatgacggccatgatttcgcctatcatccagtcctgtgatgctatttccggctcgcgc
cctggtgcccgccgcgagatcatggagtcgtacatcaagcgtctgaaagaactggaagaa
accgcccactcctttgaaggcgtgaaccagtgctacgccatccaggccggccgcgagctg
cgcgtgatggtagacgccgataacgtgaccgacgaacgcgcctcccagctgtcttttgat
atctcgcagaagattgagaaagagatgcagtacccaggccagatcaagatcacggtcatc
cgggaaatgcgctccgtttcttacgccaaatag

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