Rufibacter radiotolerans: TH63_19215
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Entry
TH63_19215 CDS
T03996
Name
(GenBank) 2-oxoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ruf
Rufibacter radiotolerans
Pathway
ruf00020
Citrate cycle (TCA cycle)
ruf00785
Lipoic acid metabolism
ruf01100
Metabolic pathways
ruf01110
Biosynthesis of secondary metabolites
ruf01120
Microbial metabolism in diverse environments
ruf01200
Carbon metabolism
ruf01210
2-Oxocarboxylic acid metabolism
Module
ruf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ruf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ruf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TH63_19215
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
TH63_19215
Enzymes [BR:
ruf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
TH63_19215
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Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AKQ47285
UniProt:
A0A0H4VMZ8
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Position
4704759..4707518
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AA seq
919 aa
AA seq
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MDKYSYIANAHGTYIDELYKQYQQDPSSVDFGWQKFFEGFDFSQTYPGENGETGVAAKPS
APAGAGASVIEVEKEIQVRNLIYAYRSRGHLRSNTNPVRPRKDRKALLDLPDFGLSEADL
DTKFQSGAELGLGNATLRDILATLKKVYERTIGFEYRYIRDPKVLDWFKEKIEKESVNFK
PSIDTKKRILSKLNEAVVFENFLHTKFLGQKRFSLEGGETTIPALDAIIDKGSELGVQEV
VIGMAHRGRLNVLANIMGKTYEQIFSEFEGTAVPDLTMGDGDVKYHMGFSSEVDTPSGHK
VNLKLAPNPSHLEAVNPVVEGFVRAKLDTMYGRDTNKILPILIHGDAAVAGQGIGYEVTQ
MAKLEGYGTGGTIHFVINNQVGFTTDFEDARSSIYCTDLAKIIDAPVIHVNGDDPEAVVF
AVRLATEYRQKFHNDVFIDMVCYRRHGHNEADEPKFTQPQLYNLISKHANPREIYTQMLV
SRGELEAKVAEEMDKEFRQMLQDRLDMVKQKPLPYNYQVLEKEWQELRRSTPEDFNQSPE
TGIPVGAIEAVGKALTTLPDNFKPLKQIEKLVKERQDMFFTNKVLNWAAAELLAYGSILQ
EGKIVRMSGQDVQRGTFSHRHAVLRDANTNAPYTNLDHIQENQHELQIYNSLLSEYGVLG
YEFGYAMANPNALVVWEAQFGDFANGAQVMIDQFISSTESKWQRMNGVVMLLPHGYEGQG
PEHSNARPERFLQLSAEYNMYVTQCTTPANFFHMLRRQLATPFRKPCIHMSPKSMLRHPS
VMSPVEDFTKGSFQEVIGDGFADAKAVTKVLLCSGKVYYDLLEEQQKTNRHDVAIIRMEQ
LHPFPEVQLVHELDKYPNAQIYWVQEEPYNMGAWTYILSVMRHRVVDVVSRKPSSSPATG
YNKIHQKEQRSIIERAFSI
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggataaatactcatatatagccaacgcccacggaacgtacatagacgagctgtacaag
cagtaccagcaagatccgtcgtctgtagactttggctggcagaaattctttgaaggattt
gacttctcccaaacgtaccccggtgaaaacggtgaaaccggcgtggcagccaagcctagc
gctccagccggggccggggcttcggtcatagaagtagaaaaagagatacaggttcgtaat
cttatttacgcctaccgctcccgcggccacctgcgctccaacaccaacccggtacgtccg
cgcaaagaccggaaggcattgttagacctccctgacttcgggctttctgaggcagatctg
gataccaaattccaaagcggcgccgagcttggcttaggtaatgccaccctgcgtgatatt
ctggctacccttaaaaaggtgtatgaaagaaccattgggtttgagtaccgctacatccgg
gaccccaaagtattggattggttcaaagagaagatagagaaagagtctgtcaactttaag
ccttctattgatacgaagaaacgcattctctccaagctgaatgaagcggtggtctttgag
aacttcctgcacactaaattcttagggcagaaacgtttctctctggaagggggcgaaacc
actatcccggccctggacgctatcatagacaaaggctctgaactaggcgtgcaggaagtt
gtgattggcatggcccaccgcggccgcctgaacgtgctggccaacatcatgggcaaaacc
tatgagcagatcttctcagagtttgagggaaccgccgttccagacttaactatgggcgac
ggggatgtgaaataccacatgggcttctccagtgaagtagacaccccgtctggccataaa
gtgaacctgaaactggcgcctaacccttcgcatttagaggcggtgaacccggtggtggaa
ggtttcgtgcgggccaaactggacactatgtatggtcgtgacaccaacaagattctgcct
atccttatccatggtgatgccgcggtggcaggccagggtattggctatgaggttacccag
atggccaagttggaaggctacggcaccggcggtaccatccacttcgtgatcaacaaccag
gtaggcttcaccaccgactttgaagacgctcgctcctctatctattgcacagacctggcc
aagatcattgacgccccggttattcacgtgaacggtgatgacccagaggcggtggttttt
gccgtgcgcttggcaacggagtaccgtcagaaattccataatgatgtgttcattgacatg
gtgtgctaccgccgccatgggcacaatgaggcagatgagccaaaattcacgcagccgcaa
ctgtacaacctcatttctaagcacgctaacccccgcgaaatctacacccagatgctggta
agccgcggggagttggaagctaaggtagccgaggaaatggacaaggagttccggcagatg
ctgcaggaccgcctggacatggttaagcagaagcctttgccttacaactaccaggtgctg
gagaaagaatggcaggaactgcgccgctctaccccagaagacttcaaccagtccccggaa
acgggtattccggtaggagctattgaggcagtaggcaaagcgcttactacccttccagac
aactttaagccactcaagcagattgagaaactggtcaaagagcgccaggatatgttcttc
accaataaggtcttgaactgggctgcggctgagttgctggcctatggttctatcttacag
gaaggcaaaattgtacgcatgagcggacaagatgtgcagcgcggaacgttctcgcaccgc
cacgccgtcttgcgggatgccaacaccaatgccccctacaccaacctggaccacattcag
gagaatcagcatgagctgcagatctataactccttgctgtctgagtatggcgtgttaggg
tatgagtttggttacgccatggccaaccccaatgccctggtggtgtgggaagcccagttc
ggtgacttcgccaacggcgcccaggtcatgattgaccagttcatctcttccacagagtct
aagtggcagcgtatgaacggcgtggtgatgttactgccgcacggctatgaaggccaggga
ccggagcactccaatgcccgcccagaacgcttcctgcagctgtctgccgagtataacatg
tacgtgacccagtgtaccacaccggcaaacttcttccacatgctgcgccgccagttggcc
acgccgttccggaagccgtgtatccatatgtctcctaagtctatgctgcgccacccaagt
gtgatgtcgccggtagaagacttcaccaaagggtctttccaggaagtgattggagacggc
ttcgccgatgccaaagccgtgaccaaagtattactgtgctccgggaaagtatactatgac
ctgttggaggaacagcagaaaaccaaccgtcatgatgtggccattatccgtatggagcag
ctgcatccgttcccagaggtgcagttggtacatgaactggacaaataccctaacgcgcag
atttactgggtacaggaagagccttacaacatgggcgcctggacctatatcctgagcgtg
atgcgccaccgtgtggtagatgtggtttcccgtaagccaagctcctcaccggctacgggt
tacaacaaaatccaccagaaagagcagcgcagcatcattgaaagagcgttcagcatttaa
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