Ruficoccus sp. ZRK36: K0V07_15470
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Entry
K0V07_15470 CDS
T07427
Name
(GenBank) hypothetical protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi00550
Peptidoglycan biosynthesis
rufi01100
Metabolic pathways
rufi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0V07_15470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0V07_15470
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rufi01011
]
K0V07_15470
Enzymes [BR:
rufi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K0V07_15470
Peptidoglycan biosynthesis and degradation proteins [BR:
rufi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K0V07_15470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QYY35685
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All DBs
Position
3547747..3549675
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AA seq
642 aa
AA seq
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MQFDKFKQWNPRLNMFFVALGVMVFVLASGLAWRQLILRGEWKQKEERQNMRRVIQPGPR
GDILDRHGNILVGNRPRFSAVVYLRELREEFDKEYSKLLNEMREKHRADNPNEPFRFDWQ
ELRWESRQRVLQRYTDQINAVLGTDKTVSIRDLQRHYWSKLLMPFPLASDLEPEEYARLI
EQLPLGSPIDIYTDTARDYPFGPTACHTLGYVVANPTGLKEDALPGEDLKTFHYKSEVGK
NGLERAFDKELQGTSGGEIWVVDRFQFQYDKPLVEIPAKQGNDVITSLDIDMQLAAEEAM
GEKTGAAVAIDIKTGEVLVMASKPGYNLNDFSPFIRQEAWDKAVEEGALYNRATQGLYAP
GSTFKMITAIAAMRNNVLEPDEILQCGTHYRVGNRLFPEHSHASFGEVDLRKALKKSSNV
FFYQVGLRTGIDKIAAEAKRLGLGEPTGIEVPFEATRMIVPTPEWKKERDGRNWNPGDTA
NVAIGQGDLFVTPLQMAAYAASMARRETRTRVTLLHDPAQKPVDHGGEPLGLSDEEYRAI
VEGMEAAAGPGGTARFAMVDGVQIAGKTGTAQVKRPSGKITLAWFLGFAPAENPQIAVAV
VMEGLVPGDHYAGGKTAAPVARAIFESYFADKDLSDLLAQGE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcgacaaattcaagcagtggaacccgcgcctgaacatgttcttcgtcgcgctg
ggggtgatggtgtttgtgctggccagcggcctggcctggcggcagctcatcctgcgcggc
gagtggaagcagaaggaagagcgccagaacatgcgccgggtgatccagcccggaccacgc
ggggacatcctcgaccggcacggtaacatcctcgtggggaaccgcccgcgcttctcggcc
gtggtttacctgcgcgagctgcgcgaggagttcgacaaggagtactcgaagctgctcaat
gaaatgcgcgagaaacaccgcgccgataacccaaacgagccctttcggttcgactggcaa
gagctgcgctgggagtctcgccagcgcgtcctgcagcgctacaccgaccagatcaacgcc
gtactcggcaccgacaagaccgtcagcatccgcgacctgcagcggcactactggagtaag
ctgctcatgccctttccgctggccagcgatctggagcccgaggagtacgcccgcctgatc
gagcagctccccctaggctctcccatcgacatctacaccgacactgcccgcgactatccc
tttgggccgacggcctgccacaccctcggctatgtcgtcgccaaccccaccggcctgaag
gaagatgccctgcccggtgaggatttaaagacctttcactataaaagcgaggtcggcaaa
aacggcctggagcgcgcctttgacaaggagctgcagggtaccagcggcggcgaaatctgg
gtggtggaccgcttccagttccagtacgacaaaccactggtcgagatccccgccaagcag
ggcaacgacgtcatcaccagtctcgacatcgacatgcagctcgccgccgaggaggccatg
ggcgagaagaccggcgccgctgtggcgatcgacattaaaacgggcgaggtgctcgtcatg
gccagtaagcccggctacaacctgaacgatttctccccctttatccggcaggaggcctgg
gataaggccgtcgaggaaggcgccctctacaaccgtgccacacagggcctttacgcaccc
ggctcgacctttaagatgatcaccgccatcgccgccatgcgtaacaacgtgctggagccg
gacgagatcctccagtgcggcacccactaccgcgtcggcaaccggctctttcccgagcac
agccatgccagcttcggtgaggtggacctgcgcaaggccctcaaaaagagcagcaacgta
ttcttttaccaggtcgggctgcgcaccggcatcgacaaaatcgccgccgaggccaagcgc
ctcggtctcggtgagcccaccggcatcgaggtgccctttgaggccacccgcatgatcgtc
cccacccccgagtggaaaaaggaacgcgacggccgcaactggaaccccggcgacaccgcc
aacgtcgccatcggccagggagacctcttcgtcacaccgcttcagatggccgcctatgcc
gcctccatggcccggcgcgagacacgcacccgcgtcaccctgctccacgatccggctcag
aagcccgttgaccacggcggtgagccgctcggcctgagcgacgaagagtaccgtgccatc
gtcgagggcatggaggctgctgccggaccgggtggcaccgcccgctttgccatggtcgac
ggcgtccagatcgccggtaagaccggtaccgcgcaggtcaagcgcccgagcggcaagatc
acgctggcttggttcctcggctttgctccggcggagaatccgcagatcgccgtcgccgtc
gtgatggaaggcctcgtacccggcgaccactacgccggtggcaaaaccgccgccccggtc
gcccgcgctatcttcgagtcctacttcgcggacaaggacctctccgacctgctcgctcag
ggcgagtga
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