Hungateiclostridiaceae bacterium KB18: A4V00_06680
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Entry
A4V00_06680 CDS
T04437
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ruk
Hungateiclostridiaceae bacterium KB18
Pathway
ruk03410
Base excision repair
ruk03430
Mismatch repair
ruk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ruk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4V00_06680
03430 Mismatch repair
A4V00_06680
03440 Homologous recombination
A4V00_06680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ruk03400
]
A4V00_06680
DNA repair and recombination proteins [BR:
ruk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A4V00_06680
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A4V00_06680
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A4V00_06680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
PIGA
Motif
Other DBs
NCBI-ProteinID:
ANU53737
UniProt:
A0A1C7GQU4
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All DBs
Position
1326795..1328861
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AA seq
688 aa
AA seq
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MGVEAVNLKLWDLSEVDKAQTVALARECGIPPLLAALLRVRGMDTKEKSGEFLSPGEFSD
PYLMKDMDRAVERIRRAVEGFEHIAVYGDYDADGVTATALLYTYLQEKGANVSFYIPQRD
SEGYGMNMAAVDTLSREGVELIVTVDNGVSAGEEIAYAKSLGMDVVVTDHHQPQETLPDA
PVIDAHREDDQSPFKELCGAGVVLKLLMALEGDRGAVLEQYGDLAALGTVGDSVSLTGEN
RLIVQRGLEIANRRERPGLAALLDSEQVTSTKLAFSVIPCINATGRMGSPERAVRLLTYR
DPESAGLLAEEIREENQNRKSVEAEVIRAAEQKLEERPELRFDRVLVVCGEGWHHGVVGI
AAARLCEMYGKPCIVLSSGDGEARGSGRSVEGFNMFQAVTECRDLLTRYGGHPMAAGLTL
PEERVGEFRRRINEYAREICPEMPFFTMKLDCTLQNRALTPATCRQLEPLEPFGAGNPQP
VFALLGVTLTDVRGLGSNMGHCKLCCKGGGLSFECVRFGVAPGDFPYPPGSVVDLAVNLQ
ESRYSRGSGVEILVRDVRLSGLDRLQCQRDFRVYEKFRRREGLSREETARLRPTREQLGA
IYTLLPKIMGPKLGLESLVLHLERYGINMGMLLFGLDLLSERGLIQFRIDGSMLSAEKLD
TKGKKDIAQSPLYGELEALTDDEERKKE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgttgaagccgtgaatttaaagctgtgggacctgtcggaggtggacaaggcccag
accgtggcccttgcaagggaatgtggtataccgccgctattggcggcccttctgcgggtg
cggggtatggacacgaaggagaagtccggggagtttctctcccccggggaattctccgac
ccatatcttatgaaggatatggacagggccgtggagcgcatacgccgggccgtggagggc
tttgagcatatcgccgtatacggcgactatgacgcggacggcgttaccgccacggccctt
ctctacacttaccttcaggagaagggggcgaacgtctccttctatatcccccagcgggac
agcgaagggtacggcatgaacatggcggcggtggataccctctcccgggagggcgtggag
ctgatagtcaccgtggacaacggcgtttcggcgggtgaggagatagcctacgcgaagtcc
cttggcatggacgtggtggtcaccgaccatcaccagccccaggagaccctgccggacgcg
cccgtaatagacgcgcaccgtgaggacgaccaaagtccctttaaggaactctgcggggcg
ggggtggtgttaaagctgcttatggccctggagggggacagaggggcagtgctggagcag
tacggcgacctggcggcgcttggcaccgtgggggattccgtcagccttaccggggagaat
cggctgatagtgcagaggggcctggaaatagcgaaccgccgggagcgtccagggcttgcc
gcccttctggacagcgagcaggtcacctctacaaagctggctttctccgttataccctgc
atcaacgccaccggccgcatgggctcgccggagcgggccgtgcgcctgctgacctatagg
gacccggagagcgccgggcttttggccgaggagatacgcgaggagaaccagaaccgcaag
tcggtggaggcagaggtcataagggccgcggagcagaagcttgaggagcggccggagctc
aggttcgaccgggtgctggtggtgtgcggggagggctggcaccacggcgtggtgggcata
gcggcggcaaggctctgcgaaatgtacggcaagccctgcatagtgctgtcctcgggggac
ggcgaggcccggggcagcggccggagcgtggagggcttcaacatgttccaggcggtcacg
gagtgccgggaccttctgacgcgctacggcgggcaccccatggcggcggggctgaccctg
ccagaggagcgtgtgggagaatttcggcggcgaataaacgaatacgctagagagatctgc
cctgaaatgcccttcttcaccatgaagctggactgcaccctgcaaaaccgggcccttacc
cccgccacctgccgccagcttgagcctttggagcccttcggggccgggaacccccagccg
gtgttcgcccttttgggcgttaccctgacggacgtgcgtggccttggcagcaatatgggc
cactgcaagctctgctgcaagggcgggggtctctccttcgagtgcgtcaggttcggcgtg
gctcccggggacttcccctatcccccgggctcggtggtggatctggcggtgaatcttcag
gagagccgttacagccgtggcagcggcgtggagatacttgtgcgggacgtgcggctcagc
ggacttgaccggctccagtgccagcgagacttccgcgtgtatgaaaagttcagacggcgc
gaagggctctcccgggaggagaccgcacgcctgcgccccacccgggagcagctgggggca
atatataccttgctgcccaagatcatgggtccgaagctggggcttgagagccttgttctc
catctggaacggtacggaataaatatgggtatgctgctgttcggcctggacctgctctca
gagcgggggctgatacagttcagaattgacggcagtatgctttcggcggaaaagcttgac
acaaagggcaagaaggatatcgcccagtctcccctatacggggagctggaggctctgacc
gatgatgaagaaaggaaaaaggagtga
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