Ruminococcus sp. SR1/5: CK1_15200
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Entry
CK1_15200 CDS
T02601
Name
(GenBank) TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family
Organism
rum
Ruminococcus sp. SR1/5
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DctP
DctM
REJ
CitMHS
DUF2639
Motif
Other DBs
NCBI-ProteinID:
CBL19634
LinkDB
All DBs
Position
1276411..1279743
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AA seq
1110 aa
AA seq
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MISAILFISFFVFLILGLPIAICLGLSSVCAILYSGTSLTIVATNMYSGISKFLLLAIPF
FVLSGNIMAKAGISKRLINFVDTCVGHKKGGIAIVCVIVACFFGAISGSGPATVAALGAV
LIPAMVEQGGFSAPFSTALMATSSSIAIVIPPSIAFVVYASITGVSIADMFMAGIVPGLL
MGVALVIIVMIEAKKHNIQPSREKASAKERWDTFKDAFWGFLMPVIILGGIYGGIFTPTE
AAAVSVVYGLFVGMVIYREVKLKDLFDILVDSAKTTGGIMLIVASASLFSFVCTKFGIAN
AASELLAGIAHNQFTFLLIVNIIFLIAGCFIDANSAMYIFIPIMLPVCKALGYDVVAFGV
MATVNLAIGQVTPPVGVNLFVAISIKIKKGLEVTLQQISRAVMPMIAASVAVLLIITYIP
AVSTALPKALAKEGSYTGDQSSDTESQSSKDSGDGSDSFNTIADYSDLDWPEMTWNFACS
TTETSTWADGGRKFGELMEKATGGKVKVNIYAADQLTNGNQSEGIQALMNGDPVQISMHS
NLIYSAFDPRFNVVSLPFIYDSYDDADAKFDGEAGEKLKEILGEYGLHCMGIAENGFREL
TNSKHEVKTVDDMKNLKVRVAGSNLLMECYKRWGADATNMNWSETYTALQQNTVEGEENP
LPAIDAASVQEVQPYCSMWDAIYDCLFFCINQDIYDSLTPEQQQVVDEAGQKAVEYERYI
NRSGDEEIMSRWEKSNGVTFTKKEDMDIDSFKKAVDGIDDWFVKELKSEGYDDAQDLVDL
FTEDSVDTVEDYSDLNWPETTWNFACSTTETSTWADGGRKFGELMEKATGGKVKVNIYAA
DQLTNGNQSEGIQALMNGDPVQISMHSNLIYSAFDPRFNVVSLPFIYDSYDDADAKFDGE
AGDKLKEILNGYGLHCMGIAENGFRELTNSKHEVKSVDDMKNLKVRVAGSNLLMECYKRW
GADATNMNWSETYTALQQNTVEGEENPLPAIDAASVQEVQPYCSMWDAIYDCLFFCINQD
IYDALTPEQQAVVDECGQKAVEYERYINRSSDDEIKARWADKNGVTFTEKKDMDIDSFKK
AVDGVDDWFVQELKKQGYNDGQDLVDLFTK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtgcaatcttatttatctccttctttgttttcctgatcctgggacttcccatt
gcgatctgcttaggtctgtcatctgtatgtgccatcctttattccggtacatctctgacg
atcgtagctacaaatatgtactccggaatcagtaaattcctgcttcttgctatcccgttc
tttgttctgtctggaaacattatggcaaaagccggtatttccaaacgactgatcaacttc
gtagatacctgcgtaggacataaaaagggcggtatcgccattgtatgtgttatcgtagcc
tgcttcttcggagcgatctccggttccggtcctgcaacggttgcggcacttggagcagtt
ctgatcccggctatggttgagcagggaggtttctccgcaccgttttccacggcattgatg
gcaacctccagttccatcgccattgtcataccgccgagtatcgcattcgttgtatacgct
tctattacaggtgtatctattgcagatatgtttatggctggtatcgttccgggacttctg
atgggtgttgctcttgtgatcatcgttatgatcgaggcaaagaaacataacattcagcca
tcccgtgaaaaagcttccgcaaaagagcgctgggatacatttaaagatgcattctgggga
ttcctgatgccggttatcatcctcgggggaatttacggtggtatctttacaccaactgag
gctgcagccgtatctgttgtttacggtctgtttgttggtatggtgatctaccgtgaggtt
aagctcaaagatctgtttgacattcttgtggattctgcaaagacaaccggtggaatcatg
ctgatcgtagcgagtgcttccctgttctcttttgtatgtaccaagtttggtattgcaaat
gcggcatctgagcttcttgccggcattgcacataatcagtttaccttccttctgatcgta
aacatcattttcctgatcgcaggatgcttcattgatgcaaactctgcgatgtacattttt
ataccgatcatgcttccggtatgtaaggctctgggctatgatgtggtagcattcggtgtt
atggcaacagttaaccttgcgatcggacaggtaacacctccggtaggtgtaaatcttttc
gttgccatcagtatcaagatcaaaaaaggtctggaggttactcttcagcagatctccaga
gcagttatgccgatgatcgctgcatccgttgcagttcttctgatcatcacttatattccg
gctgtttccacagctcttccgaaggctcttgcaaaagagggttcctatacaggagaccag
tcttctgacacagaaagccagagttccaaggattccggagacggaagtgattcctttaat
accatcgcggattacagtgatcttgactggccggagatgacatggaactttgcatgctct
acaactgaaacaagtacctgggctgacggaggacgtaagtttggtgagcttatggaaaaa
gcaaccggcggaaaagtcaaggttaatatttacgcagcagatcagctgacaaacggaaat
cagtccgagggaatccaggcactgatgaacggagatccggtacagatctccatgcattcc
aatctgatctattctgcatttgacccgagattcaatgtagtatccctgccgtttatctat
gattcctacgatgacgcggatgcaaaatttgacggtgaggccggagaaaagctgaaagag
atccttggtgagtacggacttcattgtatgggaatcgcagagaatggtttccgtgagctg
acaaacagcaagcatgaagtaaaaacagtagacgacatgaagaacctgaaggttcgtgtg
gccggttccaaccttcttatggaatgctataagagatggggggcagatgccacaaatatg
aactggtctgagacatacacagcacttcagcagaatacggtagagggtgaggagaacccg
ttgcctgcgatcgacgcagccagtgtacaggaggtacagccgtactgctccatgtgggat
gcaatctatgattgtctgttcttctgtatcaaccaggatatctatgacagcctgacaccg
gaacagcagcaggttgttgatgaggcaggccagaaggctgttgagtatgagcgttatatc
aaccgttccggcgacgaggagatcatgagccgctgggagaagagcaacggtgtgaccttt
acaaagaaagaggatatggatatcgattccttcaagaaagcagtagacggaatcgacgac
tggtttgtaaaggagcttaagagtgaaggctatgacgatgcacaggatcttgtagatctg
tttacagaggattcggtagataccgtggaggattacagtgatctgaactggcctgagaca
acctggaactttgcatgctccacaacggagacaagtacctgggctgatggaggacgtaag
ttcggtgaactcatggaaaaggctaccggaggaaaggtcaaggttaacatttacgcagcg
gatcagctgacaaacggaaatcagtccgagggaatccaggcattgatgaacggagacccg
gtacagatctccatgcattccaatctgatctattctgcatttgatccacgcttcaatgtg
gtatccctgccgttcatctatgattcctatgatgatgcagatgcgaagtttgacggagag
gccggagacaagctgaaggagatccttaacggctacggacttcactgcatgggtattgca
gagaacggattccgtgagttgacaaacagcaagcatgaggtaaaatctgtagatgatatg
aagaatctgaaggttcgtgtagccggctctaatctccttatggagtgttataagagatgg
ggggcagatgctacaaatatgaactggtccgagacctacacagcacttcagcagaatacg
gtagagggcgaggagaatccgttgcccgccatcgatgcagccagtgtacaggaggtacag
ccatattgctccatgtgggatgcaatctatgactgcctgttcttctgcatcaaccaggat
atttatgatgcgctgacaccggagcagcaggctgttgttgacgagtgtggtcagaaagct
gttgagtatgagcgttacatcaaccgttccagtgatgatgagatcaaagcacgctgggca
gacaaaaacggtgtgaccttcacagagaaaaaggacatggatatcgattcctttaagaaa
gcagtagacggtgtagatgactggtttgttcaggaactgaaaaaacagggctataatgat
ggtcaggatctggtagatctgtttacaaagtaa
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