Ruminococcus sp. SR1/5: CK1_24660
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Entry
CK1_24660 CDS
T02601
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum00470
D-Amino acid metabolism
rum00550
Peptidoglycan biosynthesis
rum01100
Metabolic pathways
rum01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CK1_24660
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CK1_24660
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CK1_24660
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rum01011
]
CK1_24660
Enzymes [BR:
rum01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CK1_24660
Peptidoglycan biosynthesis and degradation proteins [BR:
rum01011
]
Precursor biosynthesis
Amino acid ligase
CK1_24660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
RimK
CPSase_L_D2
ATP-grasp
GARS_A
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
CBL20417
LinkDB
All DBs
Position
complement(2148782..2149897)
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AA seq
371 aa
AA seq
DB search
MNKRLKEILKQYEKRKHKIIKGDESMNIVVLAGGTSTEREISIVTGTGVCKALRKKGHNA
ILVDIFCGLEPVDWDEPFGDKDYEVDSAAEYMRSFDDDIEEIKRTRRSFFGPNVLELCQA
ADIVFMGLHGSNGEDGKVQATFDLLGIRYTGTGYLSSALAMDKGLTKKIFLMDQVPTPKG
VSMLKENCTRNIHDLGMEFPVVVKTCCGGSSVGVYIVNNQKEYEDAIDGAYSYEDEVVVE
EYIRGREFSVAVVDGKAYPIIEIAPKQGFYDYKNKYQAGSTVETCPAEISPELTEKMQHY
AEAGAKALCIEGYARFDFMMKENGDMYCLEANTLPGMTPTSLIPQEAKVLGIDYPDLCEE
LIRISFKKYSK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagattaaaagaaatattaaaacaatacgaaaaaagaaaacacaagatcatc
aagggagatgaaagtatgaatatcgttgtattggcaggcggaaccagtacagaaagagag
atctccatcgtaacaggaaccggtgtctgcaaggcacttcgtaaaaaaggccataatgcc
attcttgtagatattttctgcggactggagccggtggactgggatgagccctttggagat
aaagattatgaggtagattctgcggcagagtatatgagaagcttcgatgatgatatcgaa
gagatcaaacgaacaagaagaagctttttcggaccgaatgtactggaattgtgtcaggca
gcagacattgtatttatgggacttcacggttccaacggagaggatggaaaggttcaggca
accttcgatcttctggggatccgttacacaggaaccggatatttaagcagtgcccttgct
atggataagggtctcaccaagaagatctttctcatggatcaggtaccgacaccgaagggc
gtctccatgctgaaagaaaactgtacaagaaacatccatgatcttggtatggaatttcct
gttgttgtaaaaacatgctgcggtggttccagcgtaggtgtttatattgtaaacaaccag
aaagaatatgaggatgccattgatggtgcttattcttatgaagatgaggtagttgttgaa
gagtatatcaggggccgtgagttttccgttgcagttgtagacggaaaggcttatccgatc
atcgagatcgcaccgaagcagggcttttatgattacaagaacaaatatcaggcaggctcc
acagtagaaacctgtccggctgagatctcaccggaactgaccgagaaaatgcagcattat
gcggaagctggcgcaaaggctctctgcattgagggctatgcacgttttgacttcatgatg
aaagaaaacggtgatatgtactgcctggaggcaaacacacttccgggaatgacacccacc
agtctgatccctcaggaagcaaaggtcctgggaattgactatccggacctctgtgaggaa
ctgatccgcatttcttttaagaaatacagcaaataa
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