Runella rosea: DR864_01885
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Entry
DR864_01885 CDS
T05537
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
run
Runella rosea
Pathway
run00300
Lysine biosynthesis
run00470
D-Amino acid metabolism
run00550
Peptidoglycan biosynthesis
run01100
Metabolic pathways
run01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
run00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DR864_01885
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DR864_01885
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DR864_01885
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
DR864_01885
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
run01011
]
DR864_01885
Enzymes [BR:
run01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
DR864_01885
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
DR864_01885
Peptidoglycan biosynthesis and degradation proteins [BR:
run01011
]
Precursor biosynthesis
Amino acid ligase
DR864_01885
Racemase
DR864_01885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AXE16565
UniProt:
A0A344TD44
LinkDB
All DBs
Position
complement(398683..401181)
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AA seq
832 aa
AA seq
DB search
MTATIFQNTQIDTNAAYLLTDSRQLVFPQQTIFFAINGARHDGHQFVAELYKKGVRQFVI
EQKSLDNKLLATIESFENARIWSVDSSLKALQNVAKRHRAQFDIPVIGITGSNGKTIVKE
WLGQLLSADYRTVKSPKSYNSQIGVPLSVWQMNDTHTLGIFEAGISQIHEMKALQEIIQP
SIGIFTNIGSAHDEGFRSRKQKVTEKLRLFTQCNQLIYRADYTDIDEEINLILKSVNPKC
ELISWGSSENCLIQAEWHQDTEQTYVVLKSAVETYDNQLFAVPFTDEASVENCIHCLILL
LTLGIPSAEIRQRIGRLRPISMRLELKEGINNCYLIDDTYNNDLVGLTIALNFLSQQEQR
TQKVAILSDLLQTGQKEDELYTQINTLLHEKGVQKLIAIGEAFKRNAQFIKVEAQYFTTT
NDFLAKLSTHSFRDSLVLIKGARPFQFERIVHRLQQKVHGTVLEINLDALTHNLNFYRNR
VGNDTRIMVMVKAFAYGSGSAEVAQLLQFHRVDYLAVAYTDEGVQLRQNGIELPIMVMNP
SPSTFEKLIEYQLEPEIYSHKILDEWLSFQYSGPTTEEEVKDEMQEVPIHIKLDTGMHRL
GFTEVDLPLLIHKLQQFPTLKVASVFSHLAGADEAIHNEFTRSQYERFVSGASLLEQALG
YQPLRHILNSAGIVRFPDYKLDMVRLGIGLYGVEVNRLEQRALQQIGTFKTVVSQVKHLP
AGETIGYSRNGILEKASSIATIAIGYADGFDRRFSKGVGKVLINGALCPVVGNVCMDMTM
VDATGVTVQEGDEVIIFGNDLPIVQLADQIGTISYELLTGISERVKRVFYKE
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaacgattttccaaaatacccagattgataccaacgccgcctatttgctcacc
gacagccggcagttagtttttccccagcaaaccattttttttgccatcaacggcgcccgc
cacgatggacatcaattcgtggccgaactgtacaaaaaaggcgttcgccaatttgtgatt
gaacaaaaaagcctcgacaataagctcttagccaccattgagtcttttgaaaacgcccga
atttggagcgtagatagcagtttaaaagccttacaaaacgtagcaaaacgccaccgtgct
caatttgacataccagtcataggtatcacggggagtaacggcaaaaccatcgtcaaagaa
tggctggggcaactgctcagtgccgattatcgaacggtaaaaagtcccaaaagctataac
tcacaaatcggcgtgccgctgtcggtatggcagatgaacgatacccataccttggggatt
tttgaagcggggatttcgcagattcacgaaatgaaggcacttcaggaaatcattcagccc
agcatcggcatattcaccaacatcggctctgctcacgatgagggctttagaagtcggaag
caaaaagtaaccgaaaagctgcgcctttttacccaatgtaaccaactcatttatcgcgcc
gattacacggatattgacgaagagattaaccttattttaaaatccgttaatccaaaatgc
gagttaatcagctggggttcaagcgaaaactgcctgattcaggccgagtggcatcaagac
accgaacaaacctacgtggtgctaaaatcggccgttgaaacctacgataaccaacttttt
gctgttccttttaccgacgaagcatcggtagaaaactgcattcattgcctaattctactg
cttacactgggcattccttcggctgaaattaggcaacgcatagggcgtttacggcccatt
tccatgcgtcttgagctgaaagaagggattaacaactgctatttaattgatgatacctac
aataacgaccttgtaggattgacgattgcgctcaattttttgagccaacaagaacagcgt
acccaaaaagtagcgattttgtctgatttgctgcaaacgggacaaaaagaggacgaactg
tatacccaaatcaacactttactgcacgaaaagggcgttcaaaaactcatcgccatcggc
gaagcctttaaacgaaatgcccaattcattaaggtggaagcccaatattttacgacaact
aatgactttcttgccaaattatctacccactccttccgagattcattggtacttatcaaa
ggagccaggccctttcagtttgagcgaattgtacaccgtttacagcaaaaagtccatgga
accgtgttggaaatcaacttggatgctctgacgcacaaccttaacttttaccgaaaccgc
gtcggcaacgacacacgcattatggtcatggtcaaggcgtttgcgtacggtagcggcagc
gccgaagtagctcaattattgcagtttcaccgggttgattatttggccgtggcctacacc
gacgaaggggttcaactgcgccaaaatggcattgaattgcccattatggtcatgaaccca
tcgccttctacttttgagaaactcattgaatatcaacttgaacctgagatttacagccac
aaaatcctggacgaatggctcagttttcagtattcgggccctacaacggaagaagaggtt
aaagatgaaatgcaggaggtgccgattcacatcaagcttgatacaggtatgcaccggcta
ggttttacggaagttgatttgccattgctgattcataaattacaacagttcccgacttta
aaagttgcttcagtttttagccatttggcgggagcagatgaagccattcacaatgaattt
acccgttcacaatacgagcgttttgtttcgggggcttcgctgcttgaacaggctttgggt
tatcaaccactgcgccatattctcaattcggcgggaatcgtgcggtttccagattataaa
ctggatatggtgcggttgggaatcggcctctatggcgtagaagtcaatcggctagaacaa
cgggccttgcagcaaatcggtacgttcaaaacggtggtttctcaggtaaaacacctcccc
gctggcgaaacaatcggctatagccgcaacggaattttagagaaagcctcctccatcgca
accattgccattggctacgccgacggctttgaccgccgttttagcaagggggtaggcaaa
gtacttatcaacggtgctttgtgcccggtagttggcaatgtgtgcatggacatgaccatg
gtagacgcaacgggcgtcacagttcaggaaggcgacgaagtcattatttttggaaatgac
ctgccaatcgtacaattggcagatcaaatcggaaccatttcttacgaacttttgacgggc
atcagtgagcgagtcaaacgcgttttttacaaagaataa
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