Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01385
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Entry
RBI_I01385 CDS
T03158
Symbol
icd
Name
(GenBank) Isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00020
Citrate cycle (TCA cycle)
rus00480
Glutathione metabolism
rus01100
Metabolic pathways
rus01110
Biosynthesis of secondary metabolites
rus01120
Microbial metabolism in diverse environments
rus01200
Carbon metabolism
rus01210
2-Oxocarboxylic acid metabolism
rus01230
Biosynthesis of amino acids
Module
rus_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RBI_I01385 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RBI_I01385 (icd)
Enzymes [BR:
rus01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
RBI_I01385 (icd)
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Gene cluster
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Motif
Pfam:
Iso_dh
Phe_ZIP
Sep15_SelM
Motif
Other DBs
NCBI-ProteinID:
CCO05097
UniProt:
W0U5L1
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All DBs
Position
I:complement(1544129..1545340)
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AA seq
403 aa
AA seq
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MAKIQMKTPLVEMDGDEMTRIIWQDIKDILLTPYIDLKTEYYDLGLVHRNETDDQVTVDS
ANATKKYGVAVKCATITPNAARMPEYNLKEMWKSPNGTIRAILDGTVFRTPILVKGITPY
IPTWTKPITIARHAYGDVYKNVEMKCPAGSKAELVCTDKDGKETRETIYNFECDGIIQGQ
HNKSTSIASFARACFNFALDKKQDVWFATKDTISKKYDHTFKDIFQEIYDNEYKAKFEAA
GIEYFYTLIDDAVARVIRSNGGYIWACKNYDGDVMSDMVATAYGSLAMMTSVLVSPDGIY
EYEAAHGTVQRHYYKHLKGEETSTNSVATLFAWTGALRKRGELDNLPELMNFADCLEKAT
IETIEDGVMTGDLYLLSTLENKKKVNTVDFLKAVDERLKKLLG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattcagatgaaaacaccgctcgttgaaatggacggcgacgaaatgaccaga
attatctggcaggatataaaggatattcttcttactccatatattgaccttaaaacagaa
tactatgatcttggtcttgttcatagaaatgagaccgacgatcaggtaactgttgactct
gcaaacgctacaaagaaatacggcgttgctgttaagtgcgcaactatcacacctaacgct
gcgagaatgcctgaatacaacctcaaggaaatgtggaaatcccctaacggcactatcaga
gctatccttgacggtacagttttcagaactcctatccttgttaagggtatcactccatac
attcctacatggacaaagcctatcactatcgctcgtcacgcatacggcgacgtttataag
aacgttgaaatgaagtgtcctgctggctcaaaggcagagcttgtttgcactgacaaggac
ggcaaggaaactagagaaacaatttacaactttgagtgcgacggaattattcagggtcag
cataacaagtcaacttctatcgcttcattcgcaagagcttgctttaattttgcacttgat
aagaagcaggatgtttggtttgctacaaaggatactatttcaaagaagtatgaccacaca
ttcaaggatatcttccaggagatatatgacaacgagtacaaggctaagtttgaagcggct
ggtatcgagtatttctatactcttatcgacgatgctgttgcaagagttattcgttcaaac
ggcggttatatctgggcctgcaagaactatgacggtgacgtaatgtctgacatggtagct
acagcatatggctcactggctatgatgacttctgttcttgtttcacctgacggaatctat
gaatatgaggctgctcacggtactgttcaaagacactattacaagcacctcaagggcgaa
gaaacttctacaaactcagttgccacactgttcgcatggacaggcgctctgagaaaaaga
ggcgaactcgataacctgcctgagcttatgaactttgctgattgtcttgaaaaggcaact
atcgaaactattgaagacggtgttatgacaggtgatctttatctgctttctacacttgaa
aataagaagaaagtaaatacagtggacttccttaaggctgttgacgagagacttaaaaag
cttctgggttaa
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