Ruegeria sp. THAF33: FIU92_01420
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Entry
FIU92_01420 CDS
T06269
Symbol
vjbR1
Name
(GenBank) HTH-type quorum sensing-dependent transcriptional regulator VjbR
KO
K25873
LuxR family transcriptional regulator, quorum-sensing system regulator RaiR
Organism
rut
Ruegeria sp. THAF33
Pathway
rut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU92_01420 (vjbR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rut03000
]
FIU92_01420 (vjbR1)
Transcription factors [BR:
rut03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
FIU92_01420 (vjbR1)
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GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Trans_reg_C
HTH_7
HTH_23
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
QFT71675
UniProt:
A0A5P9G9K9
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Position
270245..270964
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AA seq
239 aa
AA seq
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MATKVDLGQILQDLENTNTLEELSAVAERLRDALNVEHLTYHWVDGAGDQYGYTTYSDAW
DERYREKNYHRIDPVILGCFQRFHPVDWKSLDWSGKVAKAFLLDAQNHGVGNQGYSIPIR
GPNGQFALFTVNHSCDDQTWKNFISTYGRDLILVAHYINRKALEFEKDRQPDCPRSLSPR
EIDAITLLALGYSRAQVAHSLTISEHTLRVYIESARSKLGAHNTTHAIATALSRGLIVV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaggtcgatttgggtcaaatccttcaggatttggaaaacaccaacacgctt
gaagaactcagcgccgtagctgagcgtttgcgggacgcgttgaacgtcgagcacctgacg
tatcactgggttgacggtgccggagatcaatacggctacaccacctattcagacgcctgg
gatgagcgctacagggaaaaaaactatcaccgtatcgaccctgtgatcttggggtgtttc
cagcggtttcatccggttgactggaagtcgttggattggtccggcaaggtggcaaaggcc
ttccttctggatgcgcaaaaccatggcgttggcaatcaggggtattcaatcccaattcgg
ggtccaaatggtcagtttgccttgttcacggtcaaccacagttgtgatgatcaaacctgg
aagaactttatctcgacttacgggcgtgatttgattcttgttgcgcattacataaatcgc
aaggcgctggagtttgaaaaagacaggcagccggactgcccgcgcagcttgtcgccaagg
gaaatcgacgcgatcacacttttggcgttgggatacagccgcgcccaagtggcccattcc
ctgacgatttccgagcatacgttgcgcgtttacattgaaagcgcgcgctcaaagctgggc
gcacataacacaacccacgcaatcgccacggcactcagccggggattaatagtggtttaa
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