Rhodomicrobium vannielii: Rvan_2417
Help
Entry
Rvan_2417 CDS
T01353
Name
(GenBank) ATP dependent DNA ligase
Organism
rva
Rhodomicrobium vannielii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
ADP71641
UniProt:
E3I5C0
LinkDB
All DBs
Position
complement(2634709..2636292)
Genome browser
AA seq
527 aa
AA seq
DB search
MQAFAALLDRLYYTHATNDKAAVLKAYLARTPDPDRGFAIGVIAGTVTFELFKRALVRDL
VAERVDPVLFDLSYEYVGEMSETVAHIWPRNPHRTILNRLPPLHEAIHEFRSRSKPAIQE
YLALLLDNMTPPERWALLKLGTSTLRIGMSARSVKHVLAEFGGVEVGEIEEVWHAQTPPY
LDLFAWLEGRAPKPQAKDAVTFHPVMLAHAIDDAELAAITPDAFMAEWKYDGIRVQVVST
PAGKALFSRTGDDISGAFPDVLARVGFRGVLDGELIVREGDAIASFNHLQQRLNRKSPDP
KLIAAYPGHVILYDALDIDGRDLRALPLTERKAEMARWFDATRPDGMELAAPLAFASPGD
LQAFRAEAATLASPHIEGLMLKRLDSTYVAGRPKGLWYKWKRDPMLVDAVVMYAQRGTGR
RSSFYSDYTFGLWHDGALSPIGKAYFGFTDEELKELDKWVRHHTVARFGPVREVEKALVF
EVAFDAVHRSTRHKSGVALRFPRINRIRWDKPAREADELSALLKWVD
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccttcgccgcccttctcgaccggctctattacacgcatgcgacgaacgacaag
gccgccgtgctgaaggcgtatctcgcgcggacgccagacccggatcgcggctttgccatc
ggcgtcatcgcgggcacggtgacgttcgagctgttcaagcgcgcgctggtgcgcgacctc
gtggcggagcgcgtcgatccggtgcttttcgacctctcctatgagtatgtgggcgagatg
tcggaaacggtggcgcatatctggccgcgcaatccgcatcgcacgatcctgaaccgcctt
ccgccgcttcatgaggcgatccacgaatttcgctcgcgcagcaagcccgctatccaggag
tacctcgcgctgctgctggataacatgacgccgcccgagcgctgggcgctcctgaagctc
ggcaccagcacgctgcgcatcggcatgtcggcgcgctcggtgaagcatgtgctggcggag
ttcggcggcgtggaggtcggcgagattgaggaggtgtggcacgcgcagacgccgccctat
ctcgacctgttcgcgtggctcgaagggcgcgcgccgaagccgcaagcgaaggacgcggtg
acgttccatcccgtgatgctcgcgcacgccatcgacgacgcagagcttgccgcgatcacg
ccggacgccttcatggccgaatggaaatatgacggcatccgcgtgcaggtcgtatcgacg
cccgctggcaaggcgctgttttcgcgcacgggcgatgacatttcgggggcgttcccggat
gtactcgcgcgcgttggctttcgcggcgtgctcgacggtgaactcatcgtgcgcgagggc
gacgcgatcgcgagcttcaaccacctccagcagcggctgaaccgcaagtcgcccgatccg
aagctcatcgcggcctatccgggccatgtcatcctttacgacgcgctcgacattgatggc
cgcgaccttcgcgcgctgccactcaccgagcgcaaggccgagatggcgcgctggttcgat
gcgacgcggcccgacggcatggaactcgccgcgccgctcgcattcgcgtcgccgggtgac
ttgcaggcctttcgcgcggaggcggccacgctcgcctcgccgcatatcgaggggctgatg
ctgaagcggctcgatagcacctatgtcgcggggcggcccaaggggctctggtacaagtgg
aagcgcgacccgatgcttgtagacgccgtggtgatgtacgcccagcgcggcacgggcagg
cgctcgtcgttctactcggactacacctttggtctctggcacgacggcgcgctctcgccc
atcgggaaggcgtatttcggcttcaccgatgaggaactgaaggaactcgacaagtgggtg
cggcatcacacggtggcgcgcttcgggccggtgcgcgaggtggagaaggcgctcgtgttc
gaggtggcgttcgacgctgtgcaccggtcgacgcggcataaatcgggcgtggcgctgcgc
ttcccgcgcatcaaccgcatccgctgggacaagcctgcgcgcgaggcggatgagctgagc
gcgcttctgaagtgggtggattag
DBGET
integrated database retrieval system
