Rhododendron vialii: 131311386
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Entry
131311386 CDS
T09330
Name
(RefSeq) alpha-amylase 3, chloroplastic isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00500
Starch and sucrose metabolism
rvl01100
Metabolic pathways
rvl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
131311386
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
131311386
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
131311386
NCBI-ProteinID:
XP_058194808
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Position
12a:24757153..24775450
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AA seq
914 aa
AA seq
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MSAVAIEPLRYPCRRDHPKFTSSSKKTKAFSTNYAPLPLSVGASHCRFRPARALPIRATS
VDTAAVVETLQSDDVFFKETFPLERIQKVEGKISVRLDGGKGQENWQLTVGCNIPGKWVL
HWGVNYVKDVGRKLYAVIYFRACDIFLSFLSKCRSEWDQPPAEMRPVGSILIKDYAIETP
LKKSATVVEGNVNYEVKIDICTNKDVAAINFVLKDVETGAWYQHRGRDFKVALIDYLRED
GSIVGAKKGLGVWSGTFGQLSSIFLKSEGAHPEVEESIESGDPNLAKRLEGFFEEHSIVK
EVHINNSVSVVVQKCPKTSKNLLHIETDLTGDIVIHWGVCKDDDKKWEIPAEPYPAETTV
FKNKALRTVLKKKESVQGGWSSFTLDEGYKGFVFVLKINENTWLNCMGNDFYVPLPNSSG
LPAQSISGQRREETNQAVSPDVYTDGIIKEIRNLVGNISSEKSRKTKTKEAQESILQEIE
KLAAEAYSIFRTSIPTFSEEAVVESEALKPAAQISSGTGSGFEILCQGFNWESQKSGRWY
MELKEKIAEISSLGFTVVWLPPPTDSVSPEGYMPRDLYNLNSRYGNTDELKLLVKRFHEV
GIKVLGDVVLNHRCAQYRNQNGVWNIFGGLLNWDDRAVVADDPHFQGRGNKSSGDNFHAA
PNIDHSQEFVRKDLKEWLLWLRKEIGYDGWRLDFVRGFWGGYVKDYLDATGPYFAVGEYW
DSLSYTYGEMDHNQDAHRQRIIDWINATSGTAGAFDVTTKGILHAALERCEYWRLSDQKG
KPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGKEMQGYAYILTHPGTPAVFYDHIFSH
LRSEISALISLRNRNKIHCRSTVQITKAERDVYAAVIGEKVAVKIGPGYYKPPSGPQSWS
LAAEGKDYKVWEAS
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggtagctatagagcctcttcgatacccctgtcggagagaccaccccaaattc
acctccagttcgaaaaaaactaaggcattttctacaaattacgctccgctgcctctatcc
gttggcgccagccactgcagattcagaccggctcgagctctcccaatcagagcgacctcc
gtcgatacggcagctgtggtggagaccttgcaatccgacgacgtcttcttcaaggagaca
tttccgttagaacgcattcaaaaggtagaaggaaagatatctgtcagattggatggaggg
aaaggtcaagaaaattggcagcttactgtgggatgcaatattccggggaagtgggttctt
cattggggagtaaattatgtcaaggacgttggcaggaaattatatgcggtgatctatttt
agagcctgtgacatttttctatcttttctttcaaaatgtcgcagtgaatgggatcaacct
ccagctgagatgaggcctgtgggctccatactcattaaggattatgcaattgagactcct
ctgaagaaatcggccacagtggtagaaggaaatgtgaattatgaagtgaagatagatatt
tgtacaaacaaagatgttgcagctataaattttgttttgaaggatgtggaaactggagct
tggtatcagcacagaggaagagacttcaaggtggctcttattgactaccttcgtgaagat
ggcagtattgtaggagctaaaaagggtttgggtgtatggtcagggacgtttggacagcta
tccagcatcttcctcaaatcagaaggagctcatcctgaggttgaagaaagcattgaatcc
ggagatcctaatctagctaagcgcctagagggtttctttgaggagcactctattgtaaag
gaagttcatatcaataactcagtgagcgttgttgtacaaaaatgtccaaaaacatccaag
aatctattgcatatagaaactgatctcactggagacattgtcatccactggggtgtttgc
aaggatgatgataagaaatgggagattccagctgagccatatcctgctgaaacaacagta
ttcaagaataaagcattgcggactgtattgaagaaaaaagagagtgtgcagggtggttgg
agttcatttactttggacgaaggatacaaaggatttgtttttgtgctcaagataaatgaa
aacacatggttgaattgtatgggaaatgatttttatgtaccccttccaaattcaagtggc
ttgcctgcacaatctatttctggtcaaagacgggaagagacaaatcaagcagtttctcct
gatgtatatactgatggaatcatcaaggaaataagaaatttggtgggtaacatttcctca
gagaagagtcgcaaaacaaaaacaaaagaagctcaagaaagcattcttcaagaaatcgaa
aagctagctgcggaagcctatagcatctttagaacttctattccaaccttttcagaggaa
gctgttgtggaatccgaggcattaaaaccggccgcacaaataagttcgggaacgggttca
ggttttgaaattctgtgccaaggatttaactgggagtctcaaaaatccggaagatggtac
atggagctcaaagaaaaaattgctgaaatatcttctcttggtttcactgtggtttggtta
ccaccaccgacagactctgtgtcacctgaaggctacatgccaagggatttatacaacttg
aattccagatacggaaatactgatgagctgaagcttctggtgaaaagattccatgaagtt
ggtatcaaagttctcggagatgttgtcctaaatcaccgttgtgcacaatataggaatcaa
aatggtgtatggaatattttcggtggtcttctaaattgggatgatcgtgcagttgttgca
gatgatccacatttccagggaagaggcaacaagagtagtggagataatttccatgctgca
ccaaatatagatcattcgcaggaatttgtgaggaaggatcttaaagaatggctactttgg
ctaaggaaagaaattgggtatgatgggtggaggcttgatttcgttcggggattctggggg
ggttatgtcaaggactacttggatgcaactggaccttactttgctgtaggcgagtactgg
gattctctcagctacacttatggtgagatggatcacaatcaagatgcacataggcagaga
attattgactggatcaatgctaccagtggaactgctggtgcatttgacgtcactacaaaa
ggaattcttcatgctgcacttgaaagatgtgaatattggcgattatcagatcagaaggga
aaacctccaggagtggttgggtggtggccatctcgtgctgttacattcatagaaaatcat
gatacaggttctactcagggtcattggagattcccaggtggaaaggagatgcaagggtat
gcttacatcctgactcatcctggaacgccagcagttttctatgaccacattttctcccac
ttgcgatctgaaatttcggcacttatttccctgaggaaccggaataagatccactgtcgg
agtacagttcaaataaccaaggcagaaagggatgtttatgcagccgtgataggcgagaaa
gtggcagtgaagataggcccagggtattataaacctccaagtgggccccaaagctggtct
ttggccgcagagggaaaagattacaaggtctgggaagcctcataa
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