Rhododendron vialii: 131312651
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Entry
131312651 CDS
T09330
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6 isoform X1
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rvl01002
]
131312651
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131312651
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131312651
Peptidases and inhibitors [BR:
rvl01002
]
Cysteine peptidases
Family C85
131312651
Ubiquitin system [BR:
rvl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
131312651
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA
Motif
Other DBs
NCBI-GeneID:
131312651
NCBI-ProteinID:
XP_058196540
LinkDB
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Position
13a:13406410..13413453
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AA seq
542 aa
AA seq
DB search
MTRILVQRGSAGGSSSSNPNRSSAVAGPSSSTSAPAAQPQVNLPLVASAGKDEEIVGDLQ
EQVVVDDFVEYFGSGDIKAARSDDLSQESSHDVYKDDDEINDSEKVRIEDDDLTSGLGEL
QIMGNETEGSSGGSLQRVCGSSCPPPPPVPPPKPSSGNSSSRRFVTLGSSNSPRIGSSRR
ASAWPIVSTRTSPTGSRPSSPRSHCEAEGYNSADEQSPCFGSCYDDAVSYIFGQTERERQ
FEIDIRRAKGLEVKRMMEDGNCLFRAVADQVYGDSEGYDLVRQMCIDYMERERDHFSQFI
TEGFMSYCKRKRRDKVYGNNVEIQALAEMYNRPIHIYSYGTDCMNAEPINIFHGSYDTDT
PPIRLSYHHGNHYNSLVDPRRLAIGAGLGFSSLRGRNVDTDQVKAAIKAQQDQQIDNALL
AEGRFFSDLELTEKEIERMVMEASRAEYLSDDKFKQQLGCQESSTSGAEPSSSGARSSGS
DTKAGALADAVLSSSMQIVLSMGFSYLQVIEAYSIFGDDVDSMVCYLLETGNSSRRKGKA
TE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgacccggattttggttcagcgaggttcagctggtggttcgtcatcgtcaaaccctaac
aggtcatcggcggtggcgggacccagttcttctacttcggctccggcggctcagccgcaa
gttaaccttcctctggttgcttcagctggaaaagatgaagaaatcgtaggggatttgcag
gaacaggttgttgtggatgattttgtcgagtatttcggtagtggtgatattaaggcggct
agaagtgatgatctttcacaagaaagctctcatgatgtttacaaggatgatgatgaaatc
aatgatagtgagaaagttaggattgaggacgatgatttgacaagtggattaggtgagtta
caaattatgggaaatgaaactgagggatccagtggtggttctttgcagagggtttgtggg
agctcttgtccaccaccacctcctgtccctcccccaaagccttcctcaggaaactcgagt
tctaggagatttgttacgttgggtagttcgaattctccacggattggatcatctagaaga
gcaagtgcgtggcctattgtttcaactagaacttcaccaaccgggtcaaggccttcttcg
ccgaggtctcattgtgaagctgaagggtataatagtgctgatgaacaaagcccttgcttt
gggtcctgctatgatgatgctgtaagttatatttttggccaaacggagagggaacgccaa
tttgagattgatattagaagggccaaaggtttggaagttaaacgaatgatggaggatggg
aactgcctctttcgtgctgttgcagatcaagtatatggggactccgaaggttatgatttg
gtcagacaaatgtgcattgattatatggagcgggagagagaccacttttcgcaatttata
acggaaggtttcatgtcttattgcaagaggaagaggagagataaggtttatggaaacaac
gtggaaatccaagcattggccgaaatgtataatcgtcctattcatatttattcctacggc
acagattgtatgaatgcagagcctatcaacatattccatggaagctatgatacagacact
cctcccatacgattaagttatcaccatgggaatcattacaactcacttgttgatccacgg
cggctggccattggtgcagggcttggatttagctctctgcgggggagaaatgttgacaca
gatcaagtcaaggctgctatcaaagctcaacaagaccaacagattgataatgcactccta
gcagaaggccgatttttctcggatcttgagctcacggaaaaagagattgagcgtatggta
atggaagcttctcgggctgaatatctttctgatgacaagttcaagcagcaactcggttgc
caagaatcctccacttctggtgctgaaccatcatcatctggggctaggtcttctgggagt
gataccaaggcgggtgctctggcggatgctgttctcagtagcagcatgcaaatagtgctg
tcaatggggttcagctatctgcaagtgatcgaagcttacagcatatttggagacgatgtt
gattccatggtttgctaccttctggagactggcaatagcagcaggcgcaaaggtaaggcc
actgaatga
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