Rhododendron vialii: 131327924
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Entry
131327924 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131327924
Organism
rvl
Rhododendron vialii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH
RT_RNaseH_2
rve
Integrase_H2C2
Asp_protease_2
Retrotrans_gag
gag-asp_proteas
DDE_Tnp_IS240
Motif
Other DBs
NCBI-GeneID:
131327924
NCBI-ProteinID:
XP_058217027
LinkDB
All DBs
Position
5a:40264947..40273305
Genome browser
AA seq
1471 aa
AA seq
DB search
MYLPFPPNSFDGNMALPGLEPETSTFTTRAPDHMTTAVFGLLIIPGQLDQARLKLFPFTL
KDKAKQWFNSLKAQSLRNWGEVQDAFTTKFFPTPEDAWDYYESLAEKTQSWQFADPGDRA
MFNQGPTGSGKFSIAEHTAFETRLEEIARKLDKLELKKACPNIPALKNVINGIAPEEGNS
SQAPPPTPQLPWKQPQNAFRFPQAQGPPGFAPSAPFSHANQFQQQPAQFHQQPPKRSWED
QFSALLQGQTAINEQQTQMMNDIRNQLGKLTTTAIISLRSGKIVDNQVVMPPEPSYLPPP
IERSIPILGESPKEASKETLVEEKGKDKGKSKESVPDPRVIPTPAPFPSRLRALAKPNLN
EELHELFNQVKINIPLMDAIKQIPSYAKFLKDLCTRKRKLNVQKKIFLTEQVSSIIQTNI
APKYKDPGSPTIAVTIGEKRIEQALLDLGASVNLLPFSVYQELGLGEMKPTRVTLQLADR
SVRTPRGVVEDVLVQVGQFVYPVDFVILDTNPIDSSAASTPVILGRPFLATADAVINCRN
GLLNMTFGNMKMEVNVFNVGSQMGDDEYVNEVSLIDTLVEEHVDELLFSDLLKVALTTEK
DEFLESSEVSYLSSLLGEEDEACAINSWTPKFEVFEELPPIEKKVLPSSVEPPKLELKPL
PDTLKYVFLGDNETYPVVISSSLGNLQEVKLINSLRRHMKAIGWTIADIKGIDATLCSHH
IALEDNVKPSRQPQRRLNPIMKDVVRAEVLKLLDVGIIYPIADSKWVSPIQVVPKKSGVT
VVRNEENELVPTRIVLGHIISSDGIAVDKAKINLISNLPTPKCVKDIRSFLGHAGFYRRF
IKDFSAISRPLCHLLVKDVPFEWTAACEQAFVKLKASLTTPPIVQPPDWGLPFELMCDAS
DYAVGAVLGQRKDKHPYVIHYASKTLNDAQVNYTTTEKELLAVVFALDKFRSYLIGGTPI
VVYTDHSALKYLLTKQDAKARLIRWILLLQEFNLTIKDKKGVENVVADHLSRLQFEDPTP
SLPIVDTFPDEQLFAVSSAPWFADIVNYLATGLLPPHWSPQERRRFLLEVRMFSYDEPYL
FKYCQDQIVRRCVPDSDQRRILEFCHSEACGGHFSSKKTSAKVLQCGFYWPTLHRDAHHF
CVACERCQKLGSVSRRDEMPLTNIMVVEIFDCWGIDFMGPFPVSFGNLYILLAVDYVSKW
VEAIATRTNDAKVVVEFLKDNILSRFGMPRAIISDQGTHFCNRVFGALMKKYGINHKVST
AYHPQTNGQAELANREIKHILEKTVNPNRKDWSLRLTDALWAYHTAYKTVLGASPYRLVF
GKACHLPVELEHKAYWAIKTLNYRLPAAGAHRKLQLNELEEIRRDAYDNTAIYKAKVKDF
HDKRIHRKAFEVGQKVLLYNSKLHLFPGKLRSRWAGPYVIEHVYPHGAVGVLNPLNGKSF
KVNGQKLKPFLGTLEVGEPDEELIDPVYTVD
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgcctttcccacccaattcatttgatgggaatatggcacttccaggtctcgaa
cctgagacctccaccttcaccacacgcgcacctgaccacatgaccactgctgtatttggt
ttacttatcattccgggacaacttgatcaagctcgcttgaagttattcccattcactctc
aaagacaaggcgaaacaatggttcaattctttgaaggcacaatctttgcgcaattgggga
gaagttcaggatgctttcactactaagttctttccaacaccagaggatgcatgggattac
tatgagtcactagctgagaagactcagtcttggcagtttgcagatccgggagatagggca
atgttcaatcaaggtcctacaggttcagggaagttctctattgcggagcatacagctttt
gaaactcgtttggaggaaattgctcggaaacttgacaaattggagcttaagaaagcgtgc
cccaatattcctgctttgaagaatgtgattaatggaattgctccagaagaagggaattct
tctcaagctccaccgcccactcctcaattgccttggaagcaacctcagaatgctttccgt
ttccctcaagctcaaggtccgcctggttttgctccttctgctccattctcacatgcgaac
caatttcaacaacaacctgctcaattccaccaacaaccaccaaagcgttcttgggaagat
caatttagtgctctcttgcaaggccaaacagctatcaatgagcaacaaactcaaatgatg
aatgacatcagaaaccagttgggcaagttgacaactacggctattatttctcttcggagt
gggaagatagttgataaccaagtggtgatgcctccggaaccatcttacttgcctcctcct
atcgaacgttcaattccaatccttggggaatctcccaaggaagcaagtaaggagactctt
gtagaagaaaaaggaaaagataaaggcaaatcaaaggaaagtgtaccggatcctcgagtg
attccaacaccggcaccgtttcctagtcgtttgagagctttggcgaaaccaaatttgaat
gaggagttgcatgagttgttcaatcaagtgaagattaacattcctcttatggatgcaatt
aagcagattccgtcatatgccaagtttcttaaagatttgtgtactcggaagcgcaagctt
aatgttcaaaagaagatattccttactgagcaagtgagttctatcattcaaacgaatatc
gcgcctaagtacaaggatccggggagccctactatcgctgtaaccattggagagaagcgt
atcgaacaagctttactcgatcttggtgcaagtgttaacctgcttccgttttctgtttat
caagaacttgggttgggggagatgaagcctactcgagtcactctccaattggccgatcga
agcgttcgtacaccgaggggagtagtagaggatgttctagtgcaagttggccaattcgtt
tatccggtggattttgtgattctcgatacaaatccgatcgactcttctgctgcttctacc
ccggtgattcttggaagacccttcttagccacggcggatgcagttattaattgtcgaaat
ggacttctcaacatgaccttcggtaacatgaagatggaggtcaatgtttttaatgtgggt
agccaaatgggagatgacgagtacgttaatgaggtgagccttatcgatactcttgtagaa
gaacacgtggatgaattgcttttcagtgatcttttgaaagttgctcttacgactgaaaag
gatgaatttcttgagtcttctgaagtgagttatttgagttcattacttggtgaggaagat
gaagcttgcgctataaattcttggactccaaagtttgaagtgtttgaggagcttccacca
attgagaagaaggttctcccatctagcgttgagccaccaaaattggagttgaagcccctt
cctgatactttaaagtacgtgtttcttggagacaacgagacttatcctgtggttatttcc
tcctctcttgggaatctccaagaggtgaagttgatcaattctctaaggcggcacatgaag
gctataggatggacaattgctgatatcaaagggattgatgctactctttgctcgcatcat
attgctttggaggataatgtcaagccgtctcggcaacctcaacgtcgtttgaaccctatt
atgaaggatgtagttcgtgctgaagttttaaagctcttggatgttggaatcatttatcct
atcgccgatagcaaatgggtgagcccgattcaagttgtaccaaagaaatccggagtgaca
gttgtgcgaaatgaggagaatgagctcgtacctactcggattgtcttggggcatattata
tcgtcggatggcatcgcggtggataaggctaagatcaatcttatttccaatctcccgact
ccaaaatgcgtgaaggatatccgttcatttctcgggcatgccggattctatcgtcgattc
atcaaagactttagtgctatctctcgacctttgtgccaccttcttgtcaaagacgttccg
tttgagtggaccgccgcgtgtgagcaagcttttgttaagttgaaggctagtcttaccacc
ccgcctattgtgcaaccaccggattggggcctcccgtttgagcttatgtgtgatgcaagt
gactatgccgtaggcgctgttttggggcagaggaaggacaagcatccgtatgttatccat
tatgcaagcaagaccttgaatgatgctcaagtgaattacactaccacggagaaagagtta
cttgcggtagtgtttgctcttgataaattccggtcttatcttattgggggcacccctatt
gttgtgtatacggaccactcagctctcaagtacctacttaccaagcaagatgccaaagct
cgtttgatacgatggatcctgcttctccaagagttcaatttaactatcaaggataaaaag
ggtgtcgagaatgtggtagccgatcatttatcaaggttacagttcgaggaccctactcca
agcttacctatcgtggacacgtttccggatgaacaattgtttgctgtttcgagtgcccca
tggtttgcggatatagtgaattatttggctacgggactcttaccgccacattggtctcct
caagaacgtcgtcggttccttcttgaagtacgaatgttctcttatgatgagccttatctt
ttcaagtattgccaagatcaaatagtgcgccgttgtgtcccagattcagatcagcgaaga
attcttgagttttgtcattcagaagcttgtggaggccacttctcttctaagaagacttct
gccaaagtgctacaatgtggattttattggccaaccttgcatagggatgctcatcacttc
tgtgtagcttgtgaacgttgtcagaagcttgggagtgtgtctcggagggatgaaatgcca
ttgaccaacattatggtggttgagatctttgactgctggggcatagactttatgggacct
ttccccgtttcttttggaaatttgtacatcttattggcagttgattatgtttcaaaatgg
gtagaagccatcgcaacgcggaccaatgatgccaaggtagtggtggagttcctcaaggac
aacattctttcacgttttgggatgccgagagcaatcataagcgatcaaggaactcatttt
tgcaatcgggtttttggggcattaatgaagaagtatggaatcaatcacaaggtctccact
gcttatcatcctcagacgaatggacaagctgagttggcaaatagggaaatcaaacacatt
ttggagaagacggtgaatccgaaccggaaagattggagtcttcgtttgaccgatgcactt
tgggcttatcacacagcatacaagactgttttgggagcttcgccgtatcgtttggtcttt
ggaaaagcatgccatcttccggtagagctcgagcacaaagcatattgggcaatcaagacg
cttaattatcgtttaccagccgccggagcgcacagaaagctccaactcaatgagcttgaa
gaaattcggagagatgcttatgacaacaccgccatttacaaagccaaagtcaaggatttc
cacgacaagcgaattcaccggaaagcgtttgaggttggacagaaggtactcctatacaac
tctaaacttcatttgtttcccggtaaattacgttctcgttgggctggcccttatgttatt
gagcatgtttatcctcatggtgctgttggtgttctgaatccgttaaatggtaaatctttc
aaagttaatggccaaaagcttaaaccatttcttggtactttagaggttggagagccggat
gaggagttaatcgatccagtttacacggttgattag
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