Rhododendron vialii: 131330756
Help
Entry
131330756 CDS
T09330
Name
(RefSeq) histone deacetylase 19
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03082
ATP-dependent chromatin remodeling
rvl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131330756
03083 Polycomb repressive complex
131330756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131330756
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
131330756
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
131330756
HDAC complexes
Sin3A-HDAC complex
131330756
BRAF-HDAC complex
131330756
REST complex
131330756
SHIP complex
131330756
MiDAC complex
131330756
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
131330756
Heterochromatin formation proteins
Other heterochromatin formation proteins
131330756
Chromatin remodeling factors
NuRD complex
131330756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
131330756
NCBI-ProteinID:
XP_058220440
LinkDB
All DBs
Position
6a:complement(118180..126466)
Genome browser
AA seq
490 aa
AA seq
DB search
MEAGGNSLPSGPDGLKRKVFYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMH
VVKPALARDRDLCRFHADDYVAFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGSDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKMHERVLYV
DIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGID
DESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNV
PLLLLGGGGYTIRNVARCWCYETGVALGVEIEDKMPQHEYYEYFGPDYTLHVAPSNMENK
NSRQLLDEIKIKLLDNLSKLQHAPSVQFQERPPDTEIPEADEDQEDEDDRWGRDSDMDVV
DDCKPLSGRVKREYLEPKAMEDQKEVEYARETDTETKASYSGSMLIDEPQIKLEQDNINK
SSDQPAEMNS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggaggcaattccctgccatctgggcctgacgggttgaagagaaaagtgttc
tatttctatgacccagaggttggcaattattactatggtcaaggtcacccaatgaagccg
cacaggattcggatgacgcatgctcttctagctcactatggtttattgcagcatatgcat
gttgtaaagcctgctcttgctagagatagggatctctgcaggtttcatgctgatgattat
gttgcatttctgaggagcatcactccagaaacccaacaggatcagctcaggcaactgaag
aggttcaatgtcggggaagactgccctgtttttgatggtttgtattctttttgtcagact
tatgcgggtggttcggtcggtggtgctgtaaagttgaaccatggttccgatattgcaata
aattggtctgggggtctacatcatgcaaagaaatgtgaagcttctggattctgttatgtg
aatgatattgtcttggcaattctagagctccttaaaatgcacgagcgtgttttgtacgtg
gacattgatattcatcatggtgatggtgtagaggaggcgttttacactacagacagagtt
atgacagtttccttccacaaatttggagattacttccccgggacgggggatgtacgtgat
attggatacgggaaagggaaatattactctcttaatgtcccactagatgacggtatcgat
gatgagagctaccagtccttatttaagccaataatgggaaaagtgatggaagtttttaag
cctggtgctgtggtcctacagtgtggtgcagactctttgtcgggagatagattaggctgc
ttcaatctctcaataaaaggtcatgcagagtgtgtaaggtacatgagatctttcaatgtg
ccgttattgctgcttggtggaggtggctatacaatacgcaacgttgctcgttgctggtgc
tacgagactggggttgcacttggggttgagattgaagataagatgccacagcacgagtat
tatgagtacttcggtccagattatacacttcatgttgctccaagtaacatggaaaacaag
aactcgcgccagctcctggacgaaattaaaataaagcttcttgataatctatcaaaactt
cagcatgcaccaagtgtgcagttccaggagagaccacccgatactgagatcccagaggca
gatgaggatcaagaagacgaagatgatagatggggtcgtgattccgatatggatgttgtt
gatgactgtaagccgttgtcaggtagggtgaagagggaatatcttgagcctaaagccatg
gaggatcaaaaagaagtggaatatgcaagggaaacagatacagaaacaaaggcttcttat
tcgggatcgatgttaattgatgagccacagataaaactggaacaagacaacataaacaag
tcgtctgatcagcccgctgagatgaattcatga
DBGET
integrated database retrieval system