KEGG   Rhododendron vialii: 131330756
Entry
131330756         CDS       T09330                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
rvl  Rhododendron vialii
Pathway
rvl03082  ATP-dependent chromatin remodeling
rvl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131330756
   03083 Polycomb repressive complex
    131330756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rvl03036]
    131330756
Enzymes [BR:rvl01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     131330756
Chromosome and associated proteins [BR:rvl03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     131330756
   HDAC complexes
    Sin3A-HDAC complex
     131330756
    BRAF-HDAC complex
     131330756
    REST complex
     131330756
    SHIP complex
     131330756
    MiDAC complex
     131330756
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     131330756
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    131330756
  Chromatin remodeling factors
   NuRD complex
    131330756
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 131330756
NCBI-ProteinID: XP_058220440
LinkDB
Position
6a:complement(118180..126466)
AA seq 490 aa
MEAGGNSLPSGPDGLKRKVFYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMH
VVKPALARDRDLCRFHADDYVAFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGSDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKMHERVLYV
DIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGYGKGKYYSLNVPLDDGID
DESYQSLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNV
PLLLLGGGGYTIRNVARCWCYETGVALGVEIEDKMPQHEYYEYFGPDYTLHVAPSNMENK
NSRQLLDEIKIKLLDNLSKLQHAPSVQFQERPPDTEIPEADEDQEDEDDRWGRDSDMDVV
DDCKPLSGRVKREYLEPKAMEDQKEVEYARETDTETKASYSGSMLIDEPQIKLEQDNINK
SSDQPAEMNS
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggaggctggaggcaattccctgccatctgggcctgacgggttgaagagaaaagtgttc
tatttctatgacccagaggttggcaattattactatggtcaaggtcacccaatgaagccg
cacaggattcggatgacgcatgctcttctagctcactatggtttattgcagcatatgcat
gttgtaaagcctgctcttgctagagatagggatctctgcaggtttcatgctgatgattat
gttgcatttctgaggagcatcactccagaaacccaacaggatcagctcaggcaactgaag
aggttcaatgtcggggaagactgccctgtttttgatggtttgtattctttttgtcagact
tatgcgggtggttcggtcggtggtgctgtaaagttgaaccatggttccgatattgcaata
aattggtctgggggtctacatcatgcaaagaaatgtgaagcttctggattctgttatgtg
aatgatattgtcttggcaattctagagctccttaaaatgcacgagcgtgttttgtacgtg
gacattgatattcatcatggtgatggtgtagaggaggcgttttacactacagacagagtt
atgacagtttccttccacaaatttggagattacttccccgggacgggggatgtacgtgat
attggatacgggaaagggaaatattactctcttaatgtcccactagatgacggtatcgat
gatgagagctaccagtccttatttaagccaataatgggaaaagtgatggaagtttttaag
cctggtgctgtggtcctacagtgtggtgcagactctttgtcgggagatagattaggctgc
ttcaatctctcaataaaaggtcatgcagagtgtgtaaggtacatgagatctttcaatgtg
ccgttattgctgcttggtggaggtggctatacaatacgcaacgttgctcgttgctggtgc
tacgagactggggttgcacttggggttgagattgaagataagatgccacagcacgagtat
tatgagtacttcggtccagattatacacttcatgttgctccaagtaacatggaaaacaag
aactcgcgccagctcctggacgaaattaaaataaagcttcttgataatctatcaaaactt
cagcatgcaccaagtgtgcagttccaggagagaccacccgatactgagatcccagaggca
gatgaggatcaagaagacgaagatgatagatggggtcgtgattccgatatggatgttgtt
gatgactgtaagccgttgtcaggtagggtgaagagggaatatcttgagcctaaagccatg
gaggatcaaaaagaagtggaatatgcaagggaaacagatacagaaacaaaggcttcttat
tcgggatcgatgttaattgatgagccacagataaaactggaacaagacaacataaacaag
tcgtctgatcagcccgctgagatgaattcatga

DBGET integrated database retrieval system