Rubrobacter xylanophilus: Rxyl_0814
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Entry
Rxyl_0814 CDS
T00368
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rxyl_0814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rxy03019
]
Rxyl_0814
03110 Chaperones and folding catalysts [BR:
rxy03110
]
Rxyl_0814
03029 Mitochondrial biogenesis [BR:
rxy03029
]
Rxyl_0814
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rxy04147
]
Rxyl_0814
Enzymes [BR:
rxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Rxyl_0814
Messenger RNA biogenesis [BR:
rxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Rxyl_0814
Chaperones and folding catalysts [BR:
rxy03110
]
Heat shock proteins
HSP60 / Chaperonin
Rxyl_0814
Mitochondrial biogenesis [BR:
rxy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Rxyl_0814
Exosome [BR:
rxy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Rxyl_0814
Exosomal proteins of other body fluids (saliva and urine)
Rxyl_0814
Exosomal proteins of breast cancer cells
Rxyl_0814
Exosomal proteins of colorectal cancer cells
Rxyl_0814
Exosomal proteins of bladder cancer cells
Rxyl_0814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
PNTB
Motif
Other DBs
NCBI-ProteinID:
ABG03782
UniProt:
Q1AXU6
LinkDB
All DBs
Position
847856..849478
Genome browser
AA seq
540 aa
AA seq
DB search
MAHKELKFNTEARQALERGVNKLADAVKVTLGPKGQYVVLDKKFGSPTITNDGVTIAREI
ELEDIFENQGAQLLKEVATKTNDVAGDGTTTATVLAQIIVREGLKNVAAGANPVILRNGI
EKAVEKAVEAIREQAKEISGKDEIARVGAISARSEEVGNVIAEAIDKVGKDGVVNVEEGQ
TLGIDLEFTEGMQFDKGYLSPYFVTDQDRMEAVLEDPYILIANQKISNVQDLLPLLNQVM
QANKPLLIIAEDVEGEALATLIVNKLRGTFQSCAVKAPGFGDRRKRMMEDIAILTGGEVI
TEELGLKLENTQLSQLGRARKVVVTKDDTTIVDGAGDPEQIKGRINQIKAELETTDSDFD
REKLQERLAKLAGGVAVIKVGAATETELKEKKHRVEDALSATRAALEEGIVPGGGVALLK
AQKAVGELLDELDGDERTGARIVYRALEEPIRQIAENAGADGSIVVDKVRAQGDSIGFNA
LTGGYEDLVAAGVIDPAMVTRSALQNAASIAGLLVTTDVVVAEPEEEQPAMPGGGMGGMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcacaaggagttgaagttcaacaccgaggcgcggcaggctctggagaggggtgta
aacaagcttgccgacgcggtcaaggtcacgctcgggcccaagggccagtacgtggtgctt
gacaagaagttcggttcgccgacgatcaccaacgacggcgtaaccattgcccgggagatc
gagctcgaggacatcttcgagaaccagggtgcgcagcttctgaaggaggttgcgaccaag
accaacgacgtggccggcgacgggaccaccacggccacggttctggcgcagatcatcgtt
cgggaggggctcaagaacgtcgctgctggggccaacccggtcatcctgcgcaacgggata
gagaaggccgttgagaaggcggtcgaggccatccgggagcaggccaaggagatctccggc
aaggatgagatcgcccgggtgggtgcgatctccgcgcgcagcgaggaggtcggcaacgtc
atcgccgaggccatcgacaaggtcggcaaggacggcgtggtcaacgtcgaggagggccag
accctcggcatcgacctcgagttcaccgaggggatgcagttcgacaagggctacctctcg
ccgtacttcgtcaccgatcaggaccggatggaggcggtgctcgaggacccctacatcctc
atcgccaaccagaagatcagcaacgtccaggacctgctgccgctgctcaaccaggtgatg
caggccaacaagccgctcctgatcatcgccgaggacgtcgagggcgaggcgctggcgacc
ctgatcgtcaacaagctgcgcggcaccttccagtcctgcgcggtgaaggccccgggcttc
ggtgaccgcaggaagcggatgatggaggacatcgccatcctcaccggcggcgaggtcatc
accgaggagctcggcctcaagctggagaacacccagctctcgcagctcggccgggcccgc
aaggtcgtggtcaccaaggacgacaccaccatcgtcgacggtgccggcgatcccgagcag
ataaagggccggatcaaccagatcaaggccgagctcgagaccaccgactccgacttcgac
cgcgagaagctgcaggagcggctggccaagctcgccggcggcgtggcggtcatcaaggtc
ggcgccgccaccgagacggagctcaaggagaagaagcaccgcgtcgaggacgccctctcg
gccacccgggcggccctcgaggagggcatcgtccccggcggcggcgtggcgctgctgaag
gcccagaaggccgtgggcgagctgctcgatgagctcgacggcgacgagcggaccggcgcg
cgcatcgtctaccgggcgctggaggagccgatccgccagatcgccgagaacgccggcgcc
gacggctccatcgtggtggacaaggtgcgcgcccagggcgactccatcggcttcaacgcc
ctcaccggcggttacgaggacctggtcgccgcgggcgtcatcgaccccgccatggtcacc
cgctcggcgctgcagaacgcggcctccatcgcgggcctgctggtcaccaccgacgtggtg
gtcgccgagcccgaggaggagcagcccgcgatgcccggcggcggcatgggcggcatgatg
taa
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