Rubrobacter xylanophilus: Rxyl_2458
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Entry
Rxyl_2458 CDS
T00368
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy00061
Fatty acid biosynthesis
rxy00071
Fatty acid degradation
rxy01100
Metabolic pathways
rxy01212
Fatty acid metabolism
rxy02024
Quorum sensing
Module
rxy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rxyl_2458
00071 Fatty acid degradation
Rxyl_2458
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rxyl_2458
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rxy01004
]
Rxyl_2458
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rxy04147
]
Rxyl_2458
Enzymes [BR:
rxy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rxyl_2458
Lipid biosynthesis proteins [BR:
rxy01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Rxyl_2458
Exosome [BR:
rxy04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rxyl_2458
Exosomal proteins of breast cancer cells
Rxyl_2458
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABG05385
UniProt:
Q1AT93
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All DBs
Position
2473813..2475651
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AA seq
612 aa
AA seq
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MKGFERDRERVWEIAGRVRRARSLPEAFRMTVLEKAEKPALGEKVGGRWREFSFREVYRR
VEDFASGLAGLGVERGSRVAIMSANRVGWTVADVAIMSLGAATVPIFPTLGPRQVAHILE
DSGARVVVVEGERQLAAVRGSGASVEHLVCMDEASAGGGVLAFSEVERRGARSRDPGWEA
RMLSLRREDVATLIYTSGTSGRQKGVILTHGNLLSNLEAIIEVVPITDDDVGLSILPLSH
VLERTCSQFLNLVGGGTNYIAESVEKVQENLLEVRPTALLVVPRLFERVFAVIREQGTAN
PVRARIFESAVRTARRKYRHDAGEEAMSLARRLLFGLYDLLVYRKVRAGLGGRVRFCVSG
GARLEPWLGEFFYGAGVPVAEGYGLTETSPVISVNRFEDLRFGTVGPPLPNVEVRLSGEG
EILVRGPSVTPGYHNLPEENAAAFTQDGFFRTGDIGSFDEGGRLKITDRAKDIMVLDTGK
NVAPQPVETALANTAHIAQAMLVGDGRKFVSALIVPDFEAVRRTLGENLPAERLCADGRV
RELIRSEMEEAAAEFPEHEQPKRFALVPREWTEEEGEITPTLKLRRSAVAARYRDLIEEL
YAAGSSPQPARR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggtttgagcgagaccgggagagggtctgggagatcgcgggccgggtccggcgg
gcgcggagcctgcccgaggcgttccggatgacggtgttggagaaggcggagaagccggcg
ctcggggagaaggttggggggaggtggcgggagttcagcttccgcgaggtctaccggagg
gtcgaggactttgcgtccgggcttgccgggcttggggtggagcgcgggtcccgggtcgcc
atcatgtcggccaaccgggtgggctggacggtggcggacgtggcgatcatgagcctcggg
gcggcgacggtccccatcttccccacgctggggccgcggcaggtggcgcacatcctggag
gactccggggcccgggtcgtggtggtggagggggagcggcagctcgcggcggtccggggg
tccggggcttcggtggagcacctggtgtgcatggacgaggcgagtgccggcgggggggtg
ctggccttctccgaggtagagcggaggggagcccggagccgggacccgggctgggaggcc
cggatgctctcgctccggcgggaggacgtggcgaccctcatctacacctccggcacctcc
gggcggcagaagggggtgatcctcacccacggcaacctcctctccaacctggaggccatc
atagaggtcgtccccataaccgacgacgacgtgggcctctccatcctccccctctcgcac
gtgctggagaggacgtgcagccagttcctcaacctcgtcggcggggggaccaactacatc
gccgagtccgtggagaaggtgcaggagaacctgctggaggtgcggcccacggcgctgctc
gtcgtgccgcggctcttcgagcgggtcttcgcggtcatccgcgagcagggcaccgccaac
ccggtgcgggccaggatcttcgagagcgccgtgcgcaccgcgcggcggaagtaccggcac
gacgccggcgaggaggcgatgagccttgcccggcggctcctgttcgggctctacgacctg
ctcgtctaccgcaaggtccgggctgggctcggcggcagggtgcgcttctgcgtcagcggc
ggggcccggctggagccgtggctcggggagttcttctacggcgccggcgttccggtggcc
gagggctacggcctcaccgagacctcgcccgtgatctccgtgaaccgcttcgaggatctg
cggttcggcaccgtgggccccccgctgcccaacgtcgaggtccggctctcgggggaggga
gagatcctggtccgcggcccgagcgtgacccccggctaccacaacctgccggaggagaac
gccgccgccttcacgcaggacggcttcttccgcacaggggacatcggctccttcgacgag
gggggccggctcaagatcaccgaccgggccaaggacataatggtgctggacaccgggaag
aacgtcgccccccagccggtggagacggccctcgccaacaccgcgcacatcgcgcaggcc
atgctcgtcggggacggcagaaagttcgtctcggcgctcatcgtcccggacttcgaagcg
gtgcgccgcacgctgggcgagaacctccccgccgagcggctgtgcgccgacgggcgggtg
agggagctcatccgctccgagatggaggaggccgccgccgagttccccgagcacgagcag
cccaagcgcttcgccctcgtgccccgcgagtggacggaggaggagggcgagatcacgccg
accctcaagctgcgcaggagcgcggtcgcagcccgctacagagacctgatcgaggagctc
tacgccgcagggagctccccgcagccggcgaggaggtag
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