Rhagoletis zephyria (snowberry fruit fly): 108355635
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Entry
108355635 CDS
T08513
Name
(RefSeq) cartilage oligomeric matrix protein-like
KO
K04659
thrombospondin 2/3/4/5
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04145
Phagosome
rze04512
ECM-receptor interaction
rze04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108355635
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108355635
09142 Cell motility
04820 Cytoskeleton in muscle cells
108355635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108355635
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rze04147
]
108355635
00536 Glycosaminoglycan binding proteins [BR:
rze00536
]
108355635
Membrane trafficking [BR:
rze04131
]
Endocytosis
Phagocytosis
Opsonins
108355635
Exosome [BR:
rze04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108355635
Exosomal proteins of colorectal cancer cells
108355635
Exosomal proteins of bladder cancer cells
108355635
Glycosaminoglycan binding proteins [BR:
rze00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108355635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_3
TSP_C
EGF_3
EGF_CA
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
108355635
NCBI-ProteinID:
XP_017462273
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
STAITTAITSLDQPVPXGFRCGPCPSGYRGDGVDCRPMELACASSPCYSGVTCEETPDEV
PGYRCGACPPGLTGNGVHCEDVDECQYANPCDLRAGCINRFPVTDRGIGFQCGQCPEGYT
EDGGGGPPYGTGIEEARSARRQSCRDVDECTERGNGGCVEHSTCINTPGSFRCGPCEAGY
VGNQTVGCRPDHHGQTVCPDGRTLCNENAFCVKRKGFVNYVCQCNVGWAGDGKICGRDSD
LDGLCDYELSCADRRCRVDNCPYKPNSGQEDSDKDGIGDACDTDADNDGIPNVKDNCPLM
VNVDQANSDAGGGRDGGSGTSGNDRYGNACDNCPLVYNPTQADADGDGLGDACDDDADND
GVPNHLDNCPFVANSDQADRDGDRVGDKCDNCLAVANADQADRDKDFVGDACDTNFDRDQ
DGIQDNIDNCPSTPNSDQLDSDGDGQGDVCDFDKDNDGVPDSRDNCALVANPDQRDTNNT
GVGDACRGDFDGDGVPDIFDVCPDNRKIYATDFRSYQTVRLDPEGVSQTDPEWIIFNKGA
EIMQTINSDPGLAVGFHAFGGVDFEGTFYVESHIDDDY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
agcacagccatcacaactgcaatcaccagcctcgaccaacctgtgccanatggctttcgt
tgtggcccctgtccttcaggctaccgcggcgacggcgtcgactgtcgcccgatggagctg
gcctgcgccagcagcccctgctactcgggcgtcacctgtgaggagacgcccgacgaggtg
cccggttaccgctgcggtgcctgtccgccgggcctcaccggaaacggcgttcactgtgag
gacgtggacgaatgtcagtacgccaacccgtgtgaccttcgagcgggctgtatcaatcgc
ttcccggtcactgatcggggcattggcttccagtgtggccagtgtccggaggggtacacc
gaagatggtggcggtggacccccttacgggaccggcatagaggaggcgaggtcggcgaga
cggcaaagttgtcgcgatgtggatgaatgtactgaaagaggtaatggaggttgtgtggag
cactccacctgcatcaacacgcccggctccttccgctgtggcccctgtgaggcgggctac
gtgggcaaccagaccgtgggctgtcggcctgaccaccacggacagacggtctgtccggac
gggcggacgctctgcaatgagaacgccttctgcgtgaagcggaagggctttgtcaactac
gtctgccagtgcaatgtcggctgggcgggcgatgggaagatctgcgggcgggacagcgac
ctggacggcctctgcgactatgagctgtcctgtgctgaccggcgctgtcgagtggacaac
tgcccctacaagccgaacagcggccaggaggactcggacaaggacggcatcggagacgcc
tgcgacactgacgccgataatgacggcattcccaatgttaaggacaactgtccgctgatg
gtgaacgtcgaccaggcaaacagcgacgccggtggtggccgagatggaggcagcggtacc
agtggaaacgaccgctacggcaacgcctgcgacaactgtccgctggtgtacaatccgacg
caggcggacgccgacggggacggcctaggggacgcctgcgacgacgacgccgacaatgac
ggcgtgcccaatcacttggacaactgtccatttgtggccaatagcgaccaggcggaccgg
gacggcgaccgggtgggcgacaagtgcgacaactgcctggcggtggccaacgccgaccag
gccgaccgagacaaggactttgtgggcgacgcctgcgacaccaactttgaccgcgaccag
gacggcattcaggataacatcgacaactgccccagcacgccaaacagcgaccagctcgat
tcggacggcgacggccaaggggacgtgtgcgactttgacaaggacaacgacggcgtgccg
gacagccgcgacaactgcgccctggtggccaaccccgaccagcgggacacgaacaacacc
ggcgtgggcgatgcctgccgaggagactttgacggcgacggcgtgccggacatcttcgac
gtctgtccggacaatcggaagatctacgccaccgacttccgctcctaccagacggtccgc
ctcgacccggagggcgtctcgcagaccgaccccgagtggatcatcttcaacaagggcgcg
gagattatgcagacgatcaacagcgaccccggcctggcggtcggtttccacgcctttggg
ggcgtcgactttgagggcaccttctacgtggagtcgcacattgacgacgactat
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