Rhagoletis zephyria (snowberry fruit fly): 108362296
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Entry
108362296 CDS
T08513
Name
(RefSeq) integrin alpha-PS2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
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Paralog
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Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
108362296
NCBI-ProteinID:
XP_017470720
LinkDB
All DBs
Position
Unknown
AA seq
1546 aa
AA seq
DB search
MQLSTTKRQRERHLPPKTNSSIATSTSTTHACSESSSSNNSNNNNTSSTTHYTRLPLLLL
LLLLMTTSSHGYNIDLPSYTRHVREPNTMFGFSIALHKGRSGYAQSNSLIVGAPKFDTST
YQQGVVEAGAVFKCGMIDGDCNLVKFDSSGNHRNTYGDVIERKSYQWLGATVSTSRDNDL
IVACAPRYVFHTMTPNKSLRYDPVGTCFTSRNFTHFNEVSPCRTNNWGYHRQGSCQAGFS
AAASSRGDRLYIGAPGSWYWQGQAYSISPDATFPYKPPFYQPFGTGGQTYSYDVTRPENQ
VYSTAESSSQDDDSYLGYSMITGDFDGDRVEDIAIGMPRGAGLLGKIVVNHWNMTNIFNF
TGHQIGEYFGYALTTVDVDGNGLDDLIIGAPMYSELGNVEGKYDVGRVYILLQKATGERW
PIEHIRDGYNTKGRFGLALTTLGDINRDGYGDFAVGAPYDGSEGRGIVYIFHGSPNGPLL
KPSQIIKAEDIVEGAPYPRTFGFALSGGLDMDGNTYPDLAVGAYASDQVFIFKSRPVAAV
NAMTSFVNQSKLISLDDRSCQTVRDGKRVACTEIMTCWSYTGEYLPGSLEFDVSWVLDAK
KPKKPRMFFLLDEGKNIRNLSISLQYGKTYCRNETVYLVDNVQDKLTPLEVEMRYDLRSR
RRMAPVIRRKRDALEPVIDQNREIILRDAINIQKNCGLDNICIPDLQLDIVTVDKYLHGS
RKPLVVEVTVTNRNEDAFESAFYMEMPKDLDFIKIENLVEKGDTPITCSAPSETNNYTLK
CDLGNPLPGQKFAKFNVIMLPSQRFGMSPSYHFYMEANSTNSEIDGNRRDNVVIKNVDIW
VETDLAIEGASLPDFQLYKASDYLAVENATKEEDLGPQVVHLYNIRNNGPSFIEEAVILI
HYPNETAGGDLLMYVLNQPETHGNIVCDPHLEVNPLRLKLDTNLMYKSYLRERGVIFSTD
TTSGSSSSSGSTIYSGVEKSDGSSAAGTAVTIGRGTKELTLEEKRRLEQEDEQEVPGDAS
ATHIQRAHEAAVSSSQANYGGGAGFGDGAGGAGAGTGNSYQWSSSSSSAGGNGGGRGPMV
IVRTKNTTTSYDASGRPYVVESSTEYSTDLDRAGQYYAQPLNQHQQQQHSANYQQAGSFG
GSSGGHGNYEGAQSTRGHIQMAGPGGSGQQEQSTYSNYLGSSGGAYRPNQQQQQQEQQQR
LLQQQQQQKSYQPYDARRGSVATASSYNTNNNYNNFGGVVGGGNFEKSATGGQGFQAGVL
DLGTINRDNVDNELRQHDGQYGGNNGASYGYQQSYMRRVRSPGGTKPYYGMENEDYYDEE
GVQQQGGHQQSSARSAHFAQAQQSGGNYHQSSASSSSSSSKSYHNEEGSQQQASHAAFGS
SSQLREGATGAEADELTQIDWVSPCKAAKCQTLRCVAKNLAKDDGVWVAIRMRTVAKTME
KLAGNLPLNVSTMAASNVTRLPYIGEPKVPIIKTHEIFYKAVPEPIPVPDVVPLWVVVLA
ACAGALILLLLVYLLYKCGFFNRNRPRDHSMERQPLRNGYHGDEHL
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgcaactaagcacaacgaagcggcaaagagagcggcacttgccgcccaaaacaaacagc
agcatcgccaccagcaccagcaccacccacgcatgcagcgaaagcagcagcagcaacaac
agcaacaacaacaacaccagcagtacaacacattatactcgactgccgttactgctactg
ctgctgctcctaatgacaaccagcagccatggctataacattgatctgcccagctataca
aggcacgtgcgtgaaccgaatacaatgttcggtttcagcatcgcgttgcataagggacgc
agcggatatgcacaatcgaattctttaattgttggcgctcctaaattcgatacctccacg
taccaacagggtgtggtagaggcgggtgccgtcttcaagtgcggcatgattgacggtgac
tgcaatttggtgaaatttgattcttcaggaaatcatcgcaacacctatggcgacgttatc
gaacgaaaatcctatcagtggcttggcgctacagtgtccaccagtcgtgacaacgatttg
attgtggcttgcgcgccacgttatgtcttccatacaatgacaccaaataaatcattgcgt
tatgatccagtcggtacgtgcttcacatccaggaattttacgcatttcaatgaagtctcg
ccatgtcgcacaaataactggggttaccaccgacaaggctcctgccaggctggcttcagc
gcggccgcaagttctcgtggtgatcgtttgtacatcggtgctccaggcagttggtattgg
caaggacaagcctactcaatatcaccagatgcaacctttccatataagccgcctttttat
cagcccttcggcaccggaggtcaaacttactcgtacgacgtcacacgcccggagaatcaa
gtctactccaccgccgaaagtagctcgcaggatgacgactcttacttgggctactcaatg
atcactggtgactttgatggcgatcgcgtcgaggatattgctattggcatgccacgcggc
gccggcttgctgggcaaaatcgtcgtcaatcactggaatatgacaaatatattcaatttc
accggccatcagattggcgaatattttggctatgcgctaaccaccgtcgatgtggatggc
aatggcttggatgatttgatcattggtgcgccaatgtacagcgaacttggcaatgtggag
ggcaaatatgatgtcggtcgtgtgtatatactgctgcagaaggcgacaggtgagcgctgg
cctatcgagcacatccgcgatggttacaacaccaaaggacgtttcggtttggcacttacc
acactgggtgacatcaatcgtgatggttatggcgattttgccgtgggtgcaccgtacgac
ggttccgaaggtcgtggcatcgtttacattttccatggttcgcccaatggaccgctgttg
aagccctcacagatcatcaaggcagaagatattgtggagggcgcgccatatccacgcact
tttggcttcgcactttctggcggtctcgacatggacggcaatacgtatcccgatttagct
gtgggcgcttatgcatccgatcaagtgttcattttcaaatcacgtcccgtcgccgccgtg
aatgcaatgacctcatttgtcaatcagtccaagttgattagcttggatgatcgcagctgt
cagacggtgcgcgacggcaaacgtgttgcgtgcactgaaattatgacctgttggagttat
acgggcgaatatttgccgggcagtttggaattcgatgtatcctgggtgttggatgcgaag
aaaccgaagaagccacgtatgttcttcctgcttgacgagggcaaaaatatacgcaatctg
tcgattagtttgcaatatggcaagacctactgtcgcaacgaaacggtgtatctggtggac
aatgtgcaggacaagctgacgccactggaggtggagatgcgttacgatttgcgtagcagg
cgacgcatggcaccggtgattagacgcaagcgtgacgcactcgaaccggtcatcgatcag
aatcgggagatcattttgcgtgatgcgatcaatatacaaaagaattgtggtctggataat
atttgcatacccgatctgcagcttgatattgttactgtcgacaagtatttgcacggttca
cgtaaacctttggtcgttgaggtgaccgtaacgaatcgtaacgaagatgccttcgagtcc
gctttctacatggagatgccgaaagatttggactttattaagattgagaatttggtcgaa
aaaggcgatacacctataacctgttcggcgccatcggaaacgaacaactatacgctgaag
tgtgatcttggcaacccactgccgggacagaaattcgctaaattcaacgtcatcatgtta
ccgtcacaaagattcggtatgtctccgagctatcacttctacatggaagctaactccact
aattcggagattgatggcaatcgtcgagacaatgttgtaattaagaacgtcgacatttgg
gtcgagacagatttggctatcgaaggcgcttctttaccagacttccagctgtacaaagct
tccgattacttggcggtggaaaatgccaccaaggaagaggacttgggcccgcaagttgta
cacctttacaatatacgcaacaatggaccctcatttatcgaagaagccgtcatactcata
cactaccccaacgaaactgcgggcggtgacctgctaatgtacgttttaaaccagccagag
acgcatggcaacattgtttgcgatccacatcttgaagtcaatccactcagattaaagttg
gacacaaatttgatgtacaagtcgtacctaagagagcgaggtgtgattttctccaccgac
accaccagcggcagcagtagcagttccggttcaacaatttacagtggtgttgaaaagtct
gatggcagtagcgccgctggcacagctgtgactataggacgcggcaccaaagaactgacg
cttgaagaaaagcgacgcctggagcaggaggacgagcaggaggtgcctggtgatgcctcg
gctacacacatacaacgcgcccacgaggccgctgtgtcgagctcgcaagctaactatggt
ggtggtgctgggtttggtgatggcgctggaggcgcaggcgcaggcactggtaacagctat
cagtggtcctcgtcatcatcatcagcaggcggaaatggtggtggtcgcggtcccatggta
atagtgcgcaccaaaaatactacgaccagttatgatgccagcggtcggccgtatgttgtg
gagagcagcacggaatactcaactgatttggatcgagcgggccagtattacgcgcaacca
ttgaatcaacaccagcaacagcagcactcagcaaattatcaacaagccggcagtttcggt
ggcagtagcggcggtcatggcaactacgaaggcgcacagagcacacgcggccatatacaa
atggccggtccaggtggtagtggccagcaagagcaatcgacttactcgaattatttgggc
tcgtcgggtggcgcgtatcggcccaaccagcaacaacagcagcaggagcaacagcagcgt
ttactgcaacaacagcagcagcaaaagtcatatcagccatacgacgcgcgtcgcggctca
gttgcaactgcctccagctacaataccaacaacaattacaacaactttggcggtgttgtc
ggtggtggcaatttcgagaagtccgctacgggcggtcaaggcttccaagcaggcgtgttg
gatttgggcacaatcaaccgtgataatgtcgacaacgagctgcgccaacacgacggacaa
tatggcggcaataacggcgcatcctatggctaccagcagtcctatatgcgtcgcgtacgc
tcgcctggtggcactaaaccctattatggcatggaaaatgaagattactacgacgaggaa
ggtgtgcagcaacagggtggccatcaacagtcatccgctaggagtgcgcactttgcgcag
gcacaacaaagtggcggcaactaccatcaatcgtctgcttcatcttcatccagcagctca
aagagctaccacaacgaagaaggtagccaacagcaggcatcacatgccgcattcggatcg
agctcgcagctacgtgaaggcgccaccggtgccgaagctgatgaactcacgcaaatcgat
tgggtttcgccctgtaaggcggcgaaatgtcagacgttgcgttgtgtagcaaagaatctt
gccaaggacgatggcgtctgggtggccatacgcatgcgtactgtggcgaagacaatggag
aaattggctggtaatttgcccttgaacgtatccacaatggcggcgtcgaatgtaacacga
ctgccatatattggcgaaccaaaagtgccgattataaagacacatgaaatattctacaaa
gcggtgccggaaccgataccagtacccgatgtggtgccgctgtgggtggtggtgttggca
gcgtgtgcaggtgcactcatactgctgttgttggtctatttgctctataagtgcggcttc
ttcaatcgcaatcggccacgcgatcactccatggagcgccagccattacgaaatggttac
catggcgacgaacatctgtga
DBGET
integrated database retrieval system