Rhagoletis zephyria (snowberry fruit fly): 108363130
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Entry
108363130 CDS
T08513
Name
(RefSeq) E3 ubiquitin-protein ligase Smurf1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04120
Ubiquitin mediated proteolysis
rze04137
Mitophagy - animal
rze04144
Endocytosis
rze04341
Hedgehog signaling pathway - fly
rze04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108363130
09130 Environmental Information Processing
09132 Signal transduction
04341 Hedgehog signaling pathway - fly
108363130
04350 TGF-beta signaling pathway
108363130
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108363130
04137 Mitophagy - animal
108363130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108363130
04121 Ubiquitin system [BR:
rze04121
]
108363130
03029 Mitochondrial biogenesis [BR:
rze03029
]
108363130
Enzymes [BR:
rze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108363130
Membrane trafficking [BR:
rze04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
108363130
Autophagy
Mitophagy
Other mitophagy associated proteins
108363130
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
HECT type E3
108363130
Mitochondrial biogenesis [BR:
rze03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108363130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
108363130
NCBI-ProteinID:
XP_017471891
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MNKLDYPRRNGAHKVRITILCARNLARKDLFRLPDPFAKVQVDGTTQVYTTDISKSSLDP
KWNAHYDLFVGSNDAVTITVWNQRKINKASGFLGCVRIPADSIQRLKGMGFTRLNLGKLS
PDDDDMVRGQIIIALLSKDGPCGGNPLAVVGPSGDVRGPSEDDSSEDSLPEGWEERRAGN
GRVYYVNHATKSTQWDRPNTRQRQRSAEHNSQNPNLYQPIGPTRSTTCTNLLNGQNICSN
GRNGIEDAADERRHSTEILTATSVGSGSINNGSNTNTANQLGKENCSPTRVEKDTSNVEV
AAHNIAKKATQQIRGNGQQNQSCASAVKVSDGAAAASSQTRVSDFVPLATNTTTTATMAV
ATATTTTASTSLTVASSNVAHGRNGHNSMVPSDGPQLLGAPVTPQRPNNQNQVNGNTGVV
GANVSQPQTNGWNIETNEKPASATPTGMCSVSGNGNGSGISSVGSVGLVQSPNANSNLQL
STQSSSMQSNGNRERDRDRDRERERDLRNGGAPPPTSSSASILITSAQRSQRRAARGTED
PSRRRSSRSSRATNSSSSGGGHRHAVCNTSGANLTARPFMDLPSGYEMRTTQQGQVYFFH
IPTGVSTWHDPRIPRDFDTQHLTLDAIGPLPSGWEQRKTASGRVYFVDHNNRTTQFTDPR
FNCNILQMIRRGTLSSTGNGAGTSAVVSTGNGSIVQHLSPTASHPLSGGNGAGANNNGSG
VNGGSSTPHRLANNTAALPADLPQGLLEGAELLPKYRRDLVGKMRALRTELQTLQPQSGH
CRLEVSRNEIFEESYRLIMKMRPKDMRKRLMVKFKGEEGLDYGGVAREWLHLLSREMLNP
QYGLFQYSRDDHYTLQINPDSGVNPDHLSYFHFVGRILGIAVFHGHCLDGGFTTPFYKQL
LNKPITLSDIEGVDPELHRSLTWMLENNITGIIDSTFSVENNSFGALVVHELKPSGATIP
VTEDNKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPNQLLRPFDERELELVIGGISSI
DVNDWRINTRLKHCTPETPQVIWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGS
TGAVGPRLFTVHLTSDVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCGFAVE
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattagattatccacgtcgtaatggagcccataaagtgcgaataacaatattg
tgcgcgcggaacttggctcggaaggatttgtttcgacttcctgatccttttgccaaagtt
caggttgatggaacaacacaggtatataccacggatattagcaagtcatctctggatcct
aaatggaatgcgcattacgacctttttgtgggtagtaatgatgctgttacgattacggtg
tggaatcagcggaaaataaacaaagccagtggatttctcgggtgtgtccgcatacctgcg
gattccatacagagactgaagggaatgggatttacgagacttaatttggggaaactctca
ccagatgatgatgatatggttcgcggtcagataataattgctctattgtcgaaagatgga
ccatgcggtggtaatcccttagcggtagtagggcccagtggtgatgtacggggcccatcg
gaagacgattcgtccgaggacagtctgccagaaggttgggaggaacgtcgggcgggcaac
ggtcgtgtatattatgtaaatcatgccacaaagtcaacgcaatgggatcgtccaaatacg
cgtcaacgacaacgctcggctgagcataatagtcaaaatcctaatttgtatcagccaatt
gggccaactcgctcgacaacgtgcacaaatcttcttaatggccaaaatatctgcagtaat
ggaagaaatgggatcgaagacgccgctgacgagagacgtcattccacagaaattctcacc
gcaacgagcgtagggagtggtagtattaacaatggtagcaacacaaataccgcaaatcaa
ttaggaaaagagaattgcagcccaacgagggtggagaaggatacaagtaatgtggaagta
gcggcacataacatagcgaaaaaggctacgcagcagattcgcggaaatgggcagcaaaat
caatcttgtgcaagcgctgttaaagtatctgatggagcagcagcagcttcgtcacagacc
cgagtaagtgattttgtaccactggcaacgaataccacgacaacagcaactatggcagtt
gctacggcaaccacgacaacagcaagtacttctcttacggtggcttcgagcaatgttgcg
catgggcgcaatggccataattccatggtgcctagtgatggaccacaacttttaggagcg
ccggtaactccacagcgaccaaataaccagaatcaggtgaatggcaatactggtgtggtt
ggagcaaatgtttctcagccacagacaaatggttggaatatcgaaacaaatgagaaacca
gcctctgcgacccccactggtatgtgttcggtatcaggcaatggaaatggtagcggaatc
agcagtgttggcagcgtcggtttggtgcagagtcccaacgcaaactcaaacttgcagcta
tcaacacaatcaagttcgatgcagtcaaatggcaatcgagaaagagatcgagatcgtgat
agggaacgtgaacgtgatttacgtaatggcggtgccccgcctccaacaagttccagtgct
tcaatactaattacatcagctcaacgttcacagcgacgagctgcgcgtggtaccgaagat
ccatcgcgtcgacgttcctcgcggagctcacgcgctactaatagtagcagcagtggtggg
ggtcatcggcatgcggtttgcaatacgagtggtgctaatctgacagcgcgtccttttatg
gacttaccatcaggttatgaaatgagaacaactcaacaaggtcaagtgtacttttttcac
ataccgacgggagtatcgacgtggcatgatccgcgaatacctcgcgatttcgacactcaa
catttaactcttgacgcaattggacctctacctagtggttgggaacaaaggaagactgct
tccggaagagtgtactttgtagatcataataaccgaacgactcagtttactgatcctcga
tttaattgcaacatattgcaaatgatacgacgcggtaccctgtcaagcactggaaatggt
gctgggacgtccgcggtggtttctacgggtaatggtagcattgtacaacacctctcgcct
accgcttcacatccgttgtcgggtggaaatggcgcaggagcaaataacaatggtagtggc
gtcaatggaggttctagtacacctcatcgcttagcaaacaacactgctgctctgcctgct
gacctgccgcagggtcttctagaaggcgctgaattgctgcctaaataccgccgtgattta
gttggtaaaatgcgcgctttgcgtaccgagttgcagacactgcaaccacagtccggtcac
tgtcgccttgaagtgtcacgtaacgaaatctttgaagagagttacagactgattatgaaa
atgcggccgaaggatatgcgcaaacgtttaatggtgaaattcaaaggagaggaaggactc
gactatggtggtgttgctcgcgaatggctgcatttactctcgcgagaaatgctgaatccc
caatatggattatttcaatattcacgcgatgatcactatacgctgcaaattaatcctgat
tccggtgttaatccagatcacttgtcatattttcactttgttggccgcatcttaggaata
gcggtatttcatgggcactgtttagacggcggatttacgactcctttttataaacaacta
cttaacaaaccaatcacattaagcgacattgagggcgttgatccagagttgcaccgtagt
ttaacctggatgctggagaataacataaccggaattatcgattctacatttagtgtggaa
aataatagctttggcgcattagtagttcatgaactaaagccatctggtgccacaatacca
gttactgaggataataagcgcgaatatgttaaactctatgtgaattataggtttatgcgt
ggtattgaacaacagtttttagccttgcaaaaaggtttttgtgaacttatcccaaatcaa
cttttgcgtccattcgatgagcgcgaactggaattggtgattgggggaatttcgagcatt
gatgttaatgattggcgtataaatacaagactgaaacattgcacaccggaaactccgcaa
gttatttggttctggcaagtagtggaatcctactcttccgagatgcgtgcgcgtctttta
caatttgttactggttcatcacgtgtgccactgcagggatttcgagcactgcagggttca
actggagcagtcggaccacgtttattcactgtacaccttacttcagatgtgcccacgcaa
aatttgccaaaagcgcacacatgctttaatcgcatcgatttaccgccttatgaaacgtat
cagttgctgtgcgataagttgacgcaggctgtggaggaaacttgtggatttgctgtagaa
taa
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