Rhagoletis zephyria (snowberry fruit fly): 108366247
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Entry
108366247 CDS
T08513
Name
(RefSeq) LOW QUALITY PROTEIN: protein bicaudal D-like
KO
K18739
protein bicaudal D
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108366247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108366247
04131 Membrane trafficking [BR:
rze04131
]
108366247
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108366247
Membrane trafficking [BR:
rze04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108366247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BicD
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
108366247
NCBI-ProteinID:
XP_017476068
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MSELDNAVTVGKTNEELRMEVERLTRELDQAASERAQSAQYGLSLLEEKSALEQKCEELE
TLYDHAKHDLDITQEALAKFQTSQKXTTKTGIEQEESLLSETAELETSLNSKILDLENET
KQLRHELERVRNERDRMLQENADIGRDKSDNEAEKLRLKAELKDLKFRETRMLTEYTELE
EENISLQKQVSSLRSSQVEFEGAKHEIRRLTEEVELLNXQVDELANLKKMXEKQMEEALE
ALQCEREAKYALKKELDSHLNRESMYKISNLAYXASNMDDNISANSDGEEENLALKRLEA
DLTTELNATDGTKCDLFSEVHLNELKKLEKQLESIENEKILLTANLREAQTSLDKSQNEI
QNFMARLALLTAHVDALLQLKKQLDIKDDSIEAVKRRNDEQNVRQQLLDILSQYNSWFTL
SSKEIDGLKTDLVELQKGFNYTDAMTTLRNEVTNLKNKLLATEQKSIDLQSDVQTLTSIS
QNAGQSXGSARSTLVALSDDLAQLYHLVCTVNGEIPTRIMLDPKSDDMSFENDSLTAIQS
QFKSDIFASRSHTIEDLQGLADSVEIKKYVDTVSDQIKHLKTAVEHTIEHNKNKVRGDVS
EADKYNREEVEELQEQIVRLKGLYRLKRDQIATLRTVLKSNKQTAEVALTNLKSKYENEK
TVVSETMAKLRNELKILKEDAATFSSLRAMFAARCEEYVTQVDDLNRKLEAAEEEKKTLN
QLLRLAVQQKIELTQRMEEMEIDRETRFARRSMPPQRGSSGKSFSSRPSTRNPTGSNQNQ
FXHKISVQRKLLALVYTLLKL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattggataatgccgtcacggtcggcaaaactaacgaggaattgcgtatggaa
gtcgagcggctaactcgcgaattagatcaggcggccagtgagcgagcacagtcagcgcag
tatggtctttcgttactggaagagaaatcggcgctcgaacaaaaatgtgaggaactggaa
acgttgtacgaccacgccaagcacgatttagatataacacaagaggcacttgcaaaattt
caaacttcacagaagngtaccacaaaaactggcatcgaacaggaggagtcactgctcagc
gaaaccgcagagctcgaaaccagtttgaacagtaaaatattagacttggaaaatgaaacg
aaacagctgcgtcacgaattggagcgagtgcgaaacgaacgcgatcgtatgctgcaagag
aatgccgacattgggcgcgacaagtcggataacgaggccgagaagttgcgactcaaggcc
gagttaaaggacctaaaatttcgcgagacacgcatgctaacggaatatacagagctggaa
gaagaaaacatatcgctgcaaaagcaggtgtcaagcttgaggagttcacaggtggaattt
gaaggtgccaaacacgagatacgacgcctcaccgaggaggtggaacttttaaatncacaa
gtcgatgaattggctaatctaaaaaagatgnncgaaaaacaaatggaagaagccttggag
gctttgcagtgcgaacgtgaggcaaagtatgctctcaagaaagaattggatagccatttg
aatcgtgagtccatgtacaagataagcaatctagcatatnctgcgagcaatatggacgac
aatatcagcgcaaatagcgatggtgaagaggaaaatttggctttgaaacgacttgaagcc
gatttgactacagagttgaatgcaacagatggcacaaaatgtgatttattctctgaagtg
catctcaatgagctgaagaaattggaaaaacaattggagtccattgaaaacgagaaaatt
ctactcacagcgaatttacgagaggcacaaaccagtttggataaatcacaaaatgaaata
caaaatttcatggctcgtctggcgctcctcaccgcacatgtggatgctctactacagctg
aagaaacagctggatatcaaagacgattccatagaagcggtgaagcggcgcaacgacgag
caaaatgtacgacaacaactgttggacatactatcccagtataacagttggttcacactc
tcttcgaaggagattgacggtctcaagactgatttggttgagctacagaagggtttcaac
tacaccgacgcaatgaccactctccgcaatgaagtcacaaatttgaaaaataaattgctc
gcaactgagcaaaaatcaattgatctacaaagtgatgtgcagacactcacaagtatttca
caaaatgccggacaaagtnttgggtcggctcgctccactctggtggccttaagcgatgat
ttggcgcagctgtatcatctcgtttgcaccgttaacggcgagataccaacacgtataatg
ctcgatcccaagagcgatgacatgagtttcgaaaacgattcgcttactgccatacagtca
caattcaaatccgatattttcgcttcccgctcccacacaattgaagatttgcaagggctt
gcagattctgtagaaattaaaaagtatgtagatacagtaagtgatcaaattaaacatttg
aaaaccgctgtcgagcacaccattgagcacaacaaaaacaaagtgcgcggagatgtttcc
gaagctgacaaatataaccgcgaagaggtcgaagagttgcaagaacaaattgtacgtctc
aaaggcctgtatcgactcaaacgtgaccaaatcgctacattgcgtactgtattgaaatca
aataagcagaccgccgaagtggcactcacaaatctcaaatcgaaatatgagaatgagaag
acagtggtcagcgagacaatggccaagttgcgcaatgaactgaagatacttaaagaagat
gcggcaacattctcaagcttacgcgccatgtttgctgcgcgctgcgaggaatacgttaca
caggtagatgacctgaatcgcaaattagaagccgctgaagaggaaaagaaaacattgaat
cagctacttcgtttggccgtccaacagaaaatcgaattgactcaacgtatggaggaaatg
gaaatcgatcgtgaaacgcgctttgcacgtcggtcgatgccaccacaacgcggcagcagc
ggcaaatcgttttcatcacggccctcaacacgtaacccgactggcagcaatcagaatcaa
ttctaacataaaataagcgtgcagcgtaaacttttagccttagtttatacattgcttaag
ttataa
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