Rhagoletis zephyria (snowberry fruit fly): 108369738
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Entry
108369738 CDS
T08513
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108369738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108369738
03016 Transfer RNA biogenesis [BR:
rze03016
]
108369738
Enzymes [BR:
rze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
108369738
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
108369738
Transfer RNA biogenesis [BR:
rze03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
108369738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
Motif
Other DBs
NCBI-GeneID:
108369738
NCBI-ProteinID:
XP_017480402
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MDPFVGWFQEEQEGPALRTWCKIWETTAHDMSQLLEQQSQQLQQLQSVGNSKLNGTLSAR
DRDSLQLLLQQVGNGGFRNSIYNNNNNNNNNGSSGTNSGNTSSNNSIDSTSNNDCITPAT
TPGGGGGDINSTKMPSHDRPSYYNPSRRKIGRIVDNKASTFNLNKYMGKLVVKYKGCPWR
VPSFEYGRGIIGLHQEIEQFYNYVLPTPTEHAIRNEVVQRIEAVVHSIWPKALVEIFGSF
RTGLFLPTSDIDLVVLGLWEKAPLRTLETELIARGIAEPHSVRVLDKASVPIIKLTDRET
QVKVDISFNMQSGVQSAELIKKYKQEFPLLAKLVLVLKQFLLQRDLNEVFTGGISSYSLI
LMCISFLQLHPHQIDHDKANLGVLLLEFFELYGRKFNYMKIGISIKNGGRYIPKEDLQRE
MIDGHRPSLLCIEDPLTPGNDIGRSSYGALQVKQAFEYAYMLLANAVSPLNEFGSNCAER
TILGRIIRVTDDVIDYREWIREHFEHLVVPHTPNGSTVKFIPSMLPPGVITPPLQHQHMH
PLQQQQLYHQQQVVMAQRLRRSSVSSGEDSEDSKECDVDSTSSPPISQQHLQQQHQQQSS
LAMQHLTQQHPQSTQQQQQQQQQSQLPPQQHQQFALQQQQQLQQQQQQQQMHTQCSQQQQ
QQPQQLTQKQQSPPRQQKQPSPPQQQKQLSPPRQQQMHTQQSTQQQQQQAQQRFSGTSNR
RQQFYVPPPMQQQYQQQQQQQISKSSSTESYTNSTSSYVGNSNNNGGNNNNNRSRYAQRP
SQQQLRQQRMQQPAMRQQRYNSRAASPPPTFSRSGPLQRTTLTSASSTISIISISSESSV
ASISSTDSSESASASATSKSGQQRNREGGDRRKKHQSGSSRSSTSK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggatccttttgtcggctggtttcaagaggaacaggagggtccagcattacgcacatgg
tgtaaaatttgggagaccactgcgcatgatatgagccagttgttggaacaacaaagccaa
caattacaacaactacaaagtgttggtaatagcaaattgaacggcacgttgagtgcacgc
gatcgggattctttgcaattgctgctgcagcaagttggcaacgggggttttcgcaactcc
atttacaataataataataataacaataacaacggtagtagtggcacaaatagtggcaat
acatccagcaacaactccattgactcgacgagtaacaacgactgcatcacaccagccacc
acaccaggcggtggaggcggtgatattaatagcacgaaaatgccatcacatgatcgtcca
agctattataatccctctcgcaggaaaattgggcgtatagtagataataaggcgagcaca
tttaacctcaacaaatacatgggtaaattagttgtcaagtacaaaggttgcccttggcgt
gtgccgagctttgagtatggacggggaattatcggtttacatcaggaaatcgaacaattt
tacaattacgtcttgcccacgcccaccgaacatgctatacgcaacgaggtagtgcagcgt
atagaagcggtggtacattcaatatggccaaaggcgcttgtagagatatttggttccttc
cgcacgggtttgtttctacccacatcggatatcgatttggtcgttttaggactatgggag
aaggcgcctttgcgcactctcgaaacagaactgattgctcgcggtatcgctgaaccacac
tcggtgcgtgtacttgataaagcttcggtacccatcattaagctcacagatcgcgaaacg
caagtcaaagttgatatttcattcaatatgcagtcgggggtgcagtcggccgaattaatt
aagaaatataagcaggaatttccattgctggcgaagctggtgcttgtgctgaaacaattc
ctgctgcagcgtgatctcaatgaagtttttaccggtggcatttcctcatactcgttgata
ttgatgtgtatcagtttcctgcagttgcatccgcatcaaattgaccacgacaaagccaac
ttgggtgtgctattgctggaattttttgaactttacggacgtaagttcaattacatgaag
atcggcatatcgatcaaaaatggtgggcgatacatacctaaagaggatctacaacgtgaa
atgatcgatggtcatcgtccgtcattgctgtgcattgaggatcccctaacgccgggtaac
gatatagggcgtagctcatatggtgctttgcaggtgaaacaagcatttgagtatgcgtat
atgttgttggcaaatgcagtgagtccactcaacgaattcggtagtaattgcgccgaacgt
accatcctaggacgaataatacgggtaaccgacgatgtgatagactaccgtgagtggata
cgagaacacttcgagcatcttgtggtcccgcatacgcccaatggaagtacagttaagttc
attccatcgatgctgcctcctggcgttatcacaccacccctgcagcatcaacacatgcat
ccactgcagcagcagcagctgtatcatcagcaacaagtcgtgatggcgcaacggttacga
aggagcagcgtttcatcgggcgaagactctgaagatagcaaagaatgtgatgtagactca
acgtcatctccaccgatttctcagcagcatcttcaacaacagcaccagcaacagtcgagc
ttagcaatgcagcatttgactcagcaacacccgcaatccacacagcagcaacagcagcag
cagcagcagtcacaattgccgccccagcaacatcagcaatttgccctgcagcagcagcag
cagctgcaacaacaacaacaacaacaacaaatgcacacgcaatgttcgcaacagcaacaa
caacagccgcagcagcttacacaaaagcagcaatctccgccacggcagcaaaaacagcca
tcgccgccgcagcaacaaaagcaattatccccgccacgacaacaacagatgcacacgcaa
caatcgacgcaacaacagcagcagcaagcgcaacagaggttctccggtacatcaaatcgc
cgtcaacaattctatgtgccacctccgatgcaacagcaatatcaacagcaacagcaacag
caaatatccaaatcgtcttctacagaatcgtacacgaattccacttccagctatgttgga
aatagcaacaataatggtggcaataacaataataatcgatcacgctatgcacaacgtcct
tcacaacaacaattgcgtcagcaacgtatgcaacaaccagcaatgcgtcaacaacgttat
aattcgagagctgcatcgccgccaccaacgttttctcgttctggtccattgcaacgtacg
acactcacgtctgcttcgtcgaccatttccataatttccatatcatcggagtcttcagtg
gcatcgatatcatcgacggacagttctgagtcggcgtcagcgtcagcaacatcaaaatct
ggccaacaacgcaaccgtgaaggaggcgaccgcagaaagaagcaccaatccggtagcagt
aggtctagtacgagcaaataa
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