Rhagoletis zephyria (snowberry fruit fly): 108374558
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Entry
108374558 CDS
T08513
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03015
mRNA surveillance pathway
rze03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108374558
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108374558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108374558
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
108374558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
108374558
NCBI-ProteinID:
XP_017486024
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MADGAVLDLYAEDLDKDFAAQNQDEFAAEGVDLYDDIGGPTESSATAGGTVSVNAGDNVA
AVAGGDSAGNGGGSNGLYHQGGGSLTPNHMGRRYQLYVGNLTWWTTDQDIANVMREIGVT
DFQEVKFFENRSNGQSKGFSVISLGSEASLRLVLERLPKKELHGQAPVVTYPTKQALNQF
ESLQKTRPVPPSQQNGPPRGPAPPNMGVGGPMPPHPGGQGVPPGHPPRMMNPNMAPGQYR
PQHIQGPPVGPNAGPPRMQFQGPPGGMPIRGPRPDWSRPPMHGGFPPQGPPGGPPQGPPH
MQGPPRGPPGGPPQLGPGGPPGGPHGGPGGPAPHVNPAFFAQPGGPPQHPGGPPMSGPPH
GPPGPPQQGMGMPPQHGPPPHFAQQGAPRGPWPGPAPAKPQGPFPDQPIGPQLSEVEFEE
IMGRNRTVSSSAIARAVSDAAAGEYSSAIETLVTAISLIKQSKVAHDERCKILISSLQDT
LHGIETKSYNRRERSRSRERTHRPRQRRERSSSRYRERSRDRERERERDREGGYRERSRS
RERERPVPDHYRDDSSSSRSARPRKSPEAIAEAVSDVPSKRSYYEERYRSSDRDRERDRE
RERERDRDRDRERDRDRREEHRSRH
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggtgccgttttagacctgtacgctgaagacctggataaagattttgccgcg
cagaaccaggatgaatttgctgctgaaggtgttgatttatatgacgatatagggggtccg
accgaatcttcagctacagctggggggactgtctctgtcaatgctggcgataatgttgca
gcagtcgctggtggtgattcggccggaaacggtggcgggtccaatggtctataccatcaa
ggtggtggtagtttaacgcccaatcatatggggcggcgttatcaactatatgtcggtaac
ttaacttggtggacaactgaccaagatattgcgaatgttatgcgcgaaattggagtaacc
gatttccaagaggtaaaattttttgagaacagatcaaatggtcaatcgaaaggcttcagc
gttatatcactgggatctgaagcaagcttacgtctggttttagaacgtttgccgaaaaaa
gagcttcacgggcaagctccggtggtaacgtatccgactaaacaggcgctaaaccagttt
gagagtttgcagaagacgcgcccagttccaccgtcacaacagaatggaccgccacgtggt
cccgcacctccgaacatgggtgtggggggaccaatgccgccacatcctggtggacaaggg
gtaccccctggccatccaccacgtatgatgaatcccaatatggcgccaggccaataccgg
ccacagcacatacagggtccacctgtaggaccgaatgcagggcccccacgtatgcagttc
cagggtcccccaggaggaatgccaattcgtgggccacgtccagactggagtaggccacct
atgcatggaggctttccgcctcaaggtccacctggaggtccaccacaaggaccaccgcac
atgcaaggacccccacgtggtccgccgggcggcccgccccaactaggccctggcggccct
ccaggtggccctcacggaggccccggtggaccggcaccacacgtcaatccagccttcttt
gcccagccaggtggtccgccgcaacatcctggaggtccacccatgagtggcccgccacac
ggcccaccaggaccgccacaacagggaatgggcatgccgccacaacatggcccaccacca
cattttgctcaacaaggagcaccgcgaggcccatggccgggaccagcaccggcaaaaccg
caaggtccattccctgaccaaccaattggcccacagttatcggaggtagaatttgaagaa
atcatgggcagaaatcgcaccgttagcagctcagctatagccagagccgtttcagatgcg
gccgccggggagtactccagtgctattgaaactttggtaacggcaatttcgcttatcaag
caatcgaaagtggcacatgacgagcgttgtaaaatattgatcagctctttgcaagatacc
ttgcatggcatcgaaacaaaaagttacaatcgtcgtgagcgttcacgatctcgggaacgt
acccatcgccctagacaacgcagggaacgctcatcatctcgttatagagaacgttcacgt
gacagagagcgcgaacgcgaacgcgatcgtgaagggggatatagagaacgctctagaagc
cgggaacgtgaacgtcccgtaccagatcactacagagatgacagtagctctagccgttcc
gcacgtccccggaaatcgcctgaagcaatcgctgaagcagtcagcgatgtaccatctaag
cgcagctattatgaggaacgttatcggtcatcagatcgcgaccgcgagcgtgatagagag
cgggaaagggagcgtgatagagatcgagatcgggaaagggaccgtgatcgacgcgaggaa
catcgctcacgacattaa
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