Saccharomonospora xinjiangensis: EYD13_03360
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Entry
EYD13_03360 CDS
T05928
Name
(GenBank) RNA polymerase sigma factor
Organism
sacc
Saccharomonospora xinjiangensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC2
Sigma70_r2
Sigma70_r4_2
DUF11
Fusion_gly
Motif
Other DBs
NCBI-ProteinID:
QBQ59052
UniProt:
A0A4P7C638
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Position
complement(706958..709423)
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AA seq
821 aa
AA seq
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MTIDSPSPNGRSDADLIASVRAGRIEEYGTLYDRHATAATRLARHLCPADADAVVAESFA
TVLDALRDGEGPDHAFRAYLLATVRRTAHSKARASGRVRQAGNVTAMGAVAGTRAVSSDP
SAGELEHFERSLVARAFHRLPGRWQTVLWHMVIEQQPASEVAPLLGISPGAVPALAYRAR
ASLRQEYLQAHLAETSSPRCRATATKLGAWTRDGLSLRERAQVEQHLDHCARCRALADEL
ADVNASLRGVVAFLVLGSATLSYLTDSGAASSAITAVHEGTKSGEPGPRQFLGVAVSGVA
LATAVAVALGAGGVGTAPVAHRPQEGERPLPPPVTAPATPSPTPVGPPSHPSLPPLPAPE
LRPDSYRQPKPPLPQSPETPPVSPPPVPPPPPFPPAGPATPAEPAAPAAPPEEPLPSPGT
DPGGDTGNEVPPPEPAPRPQVSASVPGDGIRLDAGGEARVLDVALRNDGEATAADTAVAL
TLPDGVTTVAQQPGEGAEPGDGTPPEEEEEEEDGLGTGITSDDDGTPEPRTDSGQAESTA
PGHEPGTPPAVSCPPGQGTVVCEVPGGLEPREREVVRFRVTAAPEAESGAAEGRVTVAGG
DPVRFTVPITVRQDVAGLDVGVTGRQLHIEVRNEGVRPAIASVSVSLDVPGLVLYAEDLE
CEAEPLHCVSPAPLDPGQSAHLEVFVPLGHDADAVTVTASVGEDTTSEVVELMSLLPLDA
PEPEASEPGDSSSPSSSSPSPTSPSTTPAGPDPARPPAASTAFPQAPVSSSFPVFPQAPS
EEVAEDDHAPSLLGTLLRQQHRRSRRLRRRAGFPVHPRPSA
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatcgactccccgagtccgaacggccgcagcgacgccgacctcatcgcgtcggtc
cgcgcgggccgcatcgaggagtacggcacgctctacgaccggcacgccacggcggccacc
cgcctcgcgcggcacctgtgccccgccgacgccgacgccgtcgtggccgagtcgttcgcg
acggtgctcgacgcgctgcgggacggcgaaggcccggaccacgccttccgcgcctacctg
ctggccaccgttcgccgtaccgcccacagcaaagccagggcctccggccgggtgcgccag
gccggaaacgtcacggccatgggggctgtggcaggaacgcgagcggtctcgtccgatccg
tcggccggagaactcgaacacttcgaacgcagcctggtggctcgcgcgttccaccggctt
cccggacgctggcagaccgtgctgtggcacatggtgatcgagcagcagcccgcatcggag
gtcgcgccgctgctcggcatctcgccgggcgcggtgcctgcgctggcctaccgcgcccgt
gcgagcctgcggcaggagtacctccaggcgcatctcgcggaaacgtcgtcgccgcggtgc
agggcgacggcgaccaagctcggcgcgtggacgagggacgggctctcgctgcgggagcgt
gcgcaggtcgagcagcacctcgatcactgtgcccggtgcagggcactcgccgacgaactc
gccgacgtcaacgcctcgctgcgcggggtggtggccttcctcgtgctgggcagcgccacc
ctcagctacctcacggacagcggagcggcgtcatcggcgatcactgctgtccacgaggga
acgaaatccggtgagcccggcccccgccagttcctcggcgtcgcggtgtcgggtgtcgcg
ctcgccaccgccgtggccgtcgcgctcggggcaggcggtgtgggcaccgcgcccgtcgcc
caccggccgcaggaaggtgagcggcccttgcctccgccggtgacggcacccgcgacgccg
tccccgacgcccgtggggccgccgtcacacccgtcacttcccccgctgcctgccccggag
ctgaggcccgattcctaccggcagcccaagccgcccctgccgcagtcgccggagacgccg
ccggtgtcgcctccaccggtgccgcctccaccgccgtttcctcccgcaggccccgccaca
ccggccgagcccgccgcacccgccgccccgcccgaggaaccgcttccctcgccgggcacc
gaccccggaggggacaccggcaacgaggtcccaccaccggagcctgcgccgagaccgcag
gtttcggcgtccgttcccggcgacggcatcaggctggacgcgggaggtgaggccagagtc
ctcgacgtggcactgcgcaacgacggtgaggccacggcggcagacaccgctgtggcgctg
acccttcccgacggcgtcaccaccgtcgcgcagcagcccggggaaggcgccgaacccgga
gacggcaccccgcctgaggaggaggaagaggaggaggacgggctcggaaccggcatcacc
tccgacgacgacggcacacccgagccgcgaaccgacagcggtcaggccgaatccacagct
ccggggcacgagccgggcacgccgcctgccgtgtcctgccctccgggccagggcaccgtc
gtgtgcgaggttcccggcgggctggaacctcgcgagcgggaagtggtgcgcttccgcgtg
accgccgcccccgaggcggaatccggtgccgcggaggggcgggtgacggtggcgggcggc
gacccggtgcgcttcaccgtcccgatcaccgtccggcaggacgtcgcaggactcgacgtc
ggcgtgacgggaaggcagctgcacatcgaggtccgcaacgagggagtgcgtcctgccatc
gcctcagtctcggtgtccctcgacgtacccggtctcgtgttgtacgccgaggacctggaa
tgcgaggccgagccgctgcactgcgtctcccctgccccgctcgaccctggacagagcgct
caccttgaggtgttcgtcccgctgggtcacgacgccgacgccgtgacggtcaccgcatcc
gtcggtgaggacacgacgtcggaggtcgtcgagctcatgtccctcctgcccctcgatgcg
cccgaacccgaagcatccgaacccggcgactcgtcgagcccgtcctcatcgagtccgtcc
ccgacgtccccctccacaacgcctgccggacccgacccggcgaggcccccggctgcctcg
acagcgtttccgcaggcgcccgtgtcctcgtcgttcccggtgtttccgcaggcgccctcg
gaggaggtcgccgaggacgatcacgctccgtcactgctcggaacactcctccggcagcaa
catcgacgctcccgacggctcaggcgacgcgccgggttcccggtccacccacgtccctct
gcgtag
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