Streptococcus alactolyticus: O6R09_06050
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Entry
O6R09_06050 CDS
T08982
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sacy
Streptococcus alactolyticus
Pathway
sacy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sacy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
O6R09_06050 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacy03400
]
O6R09_06050 (uvrB)
DNA repair and recombination proteins [BR:
sacy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
O6R09_06050 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O6R09_06050 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
Microtub_bd
AAA_5
AAA_16
AAA_22
AAA_7
MqsA_antitoxin
AAA
UB2H
AAA_25
AAA_19
DUF87
Motif
Other DBs
NCBI-ProteinID:
WBB05857
LinkDB
All DBs
Position
complement(1175848..1177839)
Genome browser
AA seq
663 aa
AA seq
DB search
MIDRVTDNQFKLVSKYQPAGDQPEAIKELVDNIEGGEKAQILLGATGTGKTYTMSQVIAQ
VNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSV
NDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYADSVVSLRPGQEISRDQLLND
LVDIQFERNDIDFQRGRFRVRGDVVEIFPASRDDHAFRVEFFGDEIDRICEIESLTGRVL
GEVEHLAIFPATHFVTNEEHMEHAIKEILAEMEEQVKQFESEGKLIEAQRIRQRTEYDVE
MLREMGYTSGVENYSRYMDGRSEGEPPFTLLDFFPEDFLIMVDESHMTMGQIKGMYNGDR
SRKEMLVNHGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYELEQTDTIVEQIIRPT
GLLDPEVEVRPTMGQMDDLLGEINARVEKGERTFITTLTKKMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLI
QTIGRAARNSEGHVIMYADKITESMQKAMDETARRREIQMRYNKEHGIVPQTIKKDIRDL
IAISKTGDTDVAEDIPDYNSMTKKERQDTIKKLQKQMQEAAEILDFELAAQLRDMVLELK
AMD
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgattgatagggtaacagataatcagtttaaattagtatcaaaataccagcctgctggt
gaccagccagaagcaattaaggaattggttgataatattgaaggcggtgaaaaggcgcag
attctgttgggagcaacgggaactggtaaaacgtacacgatgagtcaggtgattgctcag
gttaacaagccaaccttggtcattgcccacaataaaaccttggcgggccagctttacggg
gaatttaaggaatttttccctgataatgccgtggaatatttcgtatcttattatgactat
taccaacctgaggcttatgtgccatcaagtgacacttatattgaaaaagacagctcggtg
aatgatgaaattgataaattgcgtcactcggcgacctctgccttgctggaacgtaacgat
gtgattgttgtcgcatcggtgtcttgtatctatggtttgggttcgcccaaagaatatgca
gatagcgtggttagcttacgtcctggacaagaaatctcacgtgatcagttgttgaatgac
ttagtggacattcagtttgagcgaaatgatattgatttccaacgtgggcgttttcgtgtg
cgcggtgatgtggttgaaattttcccagccagccgtgatgaccatgcctttcgtgtggaa
tttttcggggatgaaattgaccgtatctgcgaaattgaaagtttgacaggacgagtgctt
ggcgaggtggaacacttggcgattttcccagccactcacttcgtgaccaacgaagagcac
atggagcacgccatcaaggagatcttggcggaaatggaagaacaggtcaaacaatttgag
tcagaaggcaaactcatcgaggcgcaacgtattcgccagcggacagagtacgatgtggaa
atgctccgcgaaatgggctacactagcggtgtcgaaaactattctcgctatatggatggt
cgttcagaaggcgagccaccgtttaccttgctagactttttcccagaggattttctcatc
atggtggatgaaagtcacatgaccatgggacaaattaaaggcatgtataacggggaccgt
tcgcgtaaagaaatgctggttaatcacggtttccgtttgccaagtgccttggataatcgt
cctttacgtcgggaagagtttgaaagccacgttcaccaaattgtttatgtgtcagccact
ccaggtgactacgagctagagcaaacggataccattgttgaacaaatcatccgtccgact
ggattgcttgaccctgaggttgaagtgcgtccgaccatgggacaaatggacgacctgctg
ggtgaaatcaatgcccgtgtggaaaaaggtgagcgaaccttcattaccactttaaccaag
aaaatggcagaagacttgaccgattacttgaaggaaatgggcgtcaaggtcaaatacatg
cactcagatattaagacgctagaacggacagaaatcattcgtgacctgcgtctgggcgtc
tttgatgtcttaattggtatcaatttgctgcgcgaaggaattgacgtgcctgaggttagc
ttggtggccatcttggatgctgacaaagaaggttttttgcgaaatgaacgtggcttaatc
caaactatcggacgagctgctcgtaatagtgagggacacgttatcatgtatgcggacaag
attaccgaatccatgcaaaaagccatggatgaaacggctcgtcgtcgtgaaatccaaatg
cgttacaacaaagaacacggcattgtcccacaaaccattaagaaagacattcgtgatttg
attgcgatctcgaaaacgggtgacaccgacgtggcagaagatattcctgattacaacagc
atgacgaaaaaagaacgccaagacaccatcaaaaaactccaaaaacaaatgcaagaagcc
gcagaaatccttgactttgaactggcagcccaattacgcgatatggtgctagaattaaag
gcgatggattaa
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