Streptococcus agalactiae 2-22 (serotype Ib): GBS222_0721
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Entry
GBS222_0721 CDS
T02656
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sagl
Streptococcus agalactiae 2-22 (serotype Ib)
Pathway
sagl03030
DNA replication
sagl03410
Base excision repair
sagl03420
Nucleotide excision repair
sagl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sagl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GBS222_0721 (ligA)
03410 Base excision repair
GBS222_0721 (ligA)
03420 Nucleotide excision repair
GBS222_0721 (ligA)
03430 Mismatch repair
GBS222_0721 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sagl03032
]
GBS222_0721 (ligA)
03400 DNA repair and recombination proteins [BR:
sagl03400
]
GBS222_0721 (ligA)
Enzymes [BR:
sagl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
GBS222_0721 (ligA)
DNA replication proteins [BR:
sagl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GBS222_0721 (ligA)
DNA repair and recombination proteins [BR:
sagl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
GBS222_0721 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GBS222_0721 (ligA)
MMR (mismatch excision repair)
DNA ligase
GBS222_0721 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GBS222_0721 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
UPF0758_N
RTT107_BRCT_5
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
CCO74486
LinkDB
All DBs
Position
756736..758694
Genome browser
AA seq
652 aa
AA seq
DB search
MENRMNELVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEEQHPENILPNSPTHRVG
GLVLEGFEKYQHEYPLYSLQDAFSKEELIAFDKRVKAEFPTASYMAELKIDGLSVSLTYV
NGILQVGATRGDGNIGENITENLKRVHDIPLHLDQSLDITVRGECYLPKESFEAINIEKR
ANGEQEFANPRNAAAGTLRQLNTGIVAKRKLATFLYQEASPTQKETQDDVLKELESYGFS
VNHHRLISSSMEKIWDFIQTIEKDRVSLPYDIDGIVIKVNSLAMQEELGFTVKAPRWAIA
YKFPAEEKEAEILSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRIG
DTVVVYKAGDIIPAVLNVVMSKRNQQEVMLIPKLCPSCGSELVHFEDEVALRCINPLCPN
QIKERLAHFASRDAMNITGFGPSLVEKLFDAHLIADVADIYRLSIEDLLTLDGIKEKSAT
KIYHAIQSSKENSAEKLLFGLGIRHVGSKASRLLLGEFGNLRQLSQASQESIASIDGLGG
VIAKSLHTFFEKEEVDKLLEELTSYNVNFNYLGKRVSTDGQLSGLTVVLTGKLEKMTRNE
AKEKLQNLGAKVTGSVSKKTDLIVAGSDAGSKLTKAQDLGITIQDEDWLLNL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcgtatgaatgaattagtatctttgttgaatcagtacgcaaaagagtattat
acacaagataatcccacagtttctgacagtcaatatgaccagttatatcgagagttagta
gaattagaagagcaacatccagaaaacattttgccaaatagtcccacacatcgagtgggt
ggtttagttttagaaggcttcgaaaaataccaacatgaatatcctttgtattcattgcag
gatgctttctcaaaagaagaattgatagcctttgataaacgtgttaaagcagagtttcca
actgcttcttatatggcagagctgaaaattgatggtctatctgtctcgttgacttatgta
aatggtattttacaggttggggcaacacgtggtgatggcaatattggagaaaatattact
gaaaatttaaagcgtgttcatgatattcctctacatttagaccaaagtttagatattact
gttcgcggagagtgctaccttcccaaagaatcttttgaagctattaacatagaaaaacgt
gcaaatggtgagcaggaatttgctaatcctaggaatgcagcagcagggaccttgcgccaa
ttaaacacaggaattgttgcgaaacgtaaattagcaacttttctttatcaagaagctagc
cctacacaaaaagaaacacaagatgatgttttaaaagagctagaaagctatggcttttca
gtcaatcatcatcgtttaattagctcttctatggagaaaatttgggattttatccaaact
atagaaaaagatagagtttcccttccttatgatatcgatggtattgttattaaggttaat
agcttagcaatgcaagaagagttgggcttcactgtaaaggcacctcgttgggcgattgca
tataaatttcctgctgaagaaaaggaagcagaaatattatctgttgattggacagttggg
cgaacaggagtcgtaacaccaacagctaacctaactccagttcaactagcagggacaacc
gttagtagggccactctgcataatgtagattatattgccgaaaaagatatccgtattgga
gatactgttgttgtatacaaagcaggggatatcatccctgcagtcttaaatgtcgttatg
agtaagcggaaccagcaagaagtcatgcttattcctaaactatgcccttcttgtggtagt
gaattagttcattttgaagatgaggtggctttacgttgtattaatccgctgtgccccaac
caaatcaaagaacgtttagctcattttgctagccgagatgctatgaatattacaggtttt
ggtccatccttagtcgaaaaattatttgatgctcatttaatagcagatgttgcagatatt
tatcgtttaagtatagaggatttattaactttagatggtattaaagagaaatctgcaact
aagatttatcatgcaatccaatcttcaaaagaaaattctgctgaaaaacttctttttggt
ctaggtattcgtcatgtgggaagcaaggcgagccgccttttattgggggaatttggtaat
ttgaggcaattaagtcaagcaagtcaagaaagtattgcctcaattgatggactaggaggg
gttattgccaaatcacttcatacgttctttgaaaaagaagaggtagataaactactagag
gaattaacttcctataacgttaattttaattatctaggaaaacgagttagtacagatgga
caactttcaggtttaacagtcgttttaaccggaaaacttgaaaagatgactcgtaatgaa
gcaaaagagaaattacaaaaccttggtgctaaggtgacaggtagcgtttctaaaaagact
gatttaattgttgcaggaagcgatgcaggaagtaaactaaccaaggctcaagatttaggg
attacaatacaagatgaagactggttactcaacctttaa
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