Staphylococcus agnetis: EP23_03940
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Entry
EP23_03940 CDS
T04155
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sagq
Staphylococcus agnetis
Pathway
sagq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sagq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EP23_03940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagq03400
]
EP23_03940
Enzymes [BR:
sagq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EP23_03940
DNA repair and recombination proteins [BR:
sagq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EP23_03940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
nSTAND3
AAA_22
AAA_12
T2SSE
DEAD
UvrD_C
AAA_18
AAA
PIF1
AAA_14
TsaE
AAA_28
Mg_chelatase
AAA_16
AAA_29
UvrD-helicase
Zeta_toxin
RsgA_GTPase
PhoH
Endonuclease_NS
ABC_tran
AAA_17
NACHT
NTPase_1
DUF4926
Motif
Other DBs
NCBI-ProteinID:
ALN76581
LinkDB
All DBs
Position
complement(803133..805505)
Genome browser
AA seq
790 aa
AA seq
DB search
MENPTLFEQSYIKGNIEVILFQNSDNYYTVLKVEVEDSNEDFETMATVVGYFPNIVEGET
YTFKGQVAEHPRYGKQLKAETFQKEIPQTRDSIVQYLSSDLFKGVGKKTAESIVDTLGDN
AIQSILNDASVLEQVPKLSRAKQQQIAEQVSQNQASEQIMIRLNELGFGAKLAMDIYKFY
KDETINVIDQNPYQLVYDIRGVGFQKADQLASLVGISYTHPNRLKAGIQYIVEEICIKQG
HTYLPKDTLMTESSTLLTKQHETAIDQTMLEDVLSQLIEEQRLINDNDHIAIPSLYYSEL
KSSQNIYKLMHNQVFMDTFDQSDIQLHIGEIEESNGVTYAEAQKEALEAAMQNKMMILTG
GPGTGKTTVIKGIVHLYAALHGISLNYDDYGDEDYPVVLAAPTGRASKRLHDATGLEAMT
IHRLIGWNQDTKPEDILDNEIHAKLIIIDEMSMVDTWLFHQFMAAVPEDAQVVLVGDEDQ
LPSVGPGQVFKDLISSKSLKRINLKEVYRQQDGSSIIALAHNMKAGLNVDITERFHDRSF
IPCHIDQIPEVVRKVVTNAVSKGYDMSDIQVLAPMYRGNAGIHKLNKVLQDILNPIENDD
TRAIHFGDIVYRKGDKVLQLVNRPNDNIFNGDIGVIVGIFWAKENALNKDVVIVDYEGNE
ITYLKSDLTELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVF
LGDSDAFNIGLKTEGQVRLTRQQSFLEQYFNSEETSSEVISLTEDTMYSIDPMINMQNVS
PYDFMEIDNV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaacccaacactatttgaacagtcatatatcaaagggaatatcgaagtcattctt
tttcaaaatagtgataattactatacggtcctcaaagtagaggttgaagattctaatgaa
gactttgaaacaatggcaacagttgttgggtattttccaaatatcgttgaaggcgaaaca
tatactttcaaaggtcaagtagcagaacatcctcggtacggcaaacaattaaaagcagaa
acgtttcaaaaagaaatacctcaaacgagagattctattgttcaatatttatcaagtgac
ctgtttaaaggtgtgggtaaaaaaacagcagaatccattgtagatacattaggtgacaat
gcaattcagtctattttaaatgacgcatcagttcttgaacaagtaccgaaattgtctaga
gcaaagcaacagcaaattgcagaacaagtgtctcaaaatcaagcgagtgaacaaatcatg
attcgcttaaacgaacttggttttggtgcgaaattggccatggatatttataaattttat
aaggatgagaccattaacgttattgatcaaaatccctatcaactcgtatatgatatacgt
ggcgtaggctttcaaaaagctgatcaacttgcaagtttagtaggtatttcgtatacacac
ccaaatcgacttaaagcagggattcaatacattgtagaagaaatctgtattaaacagggg
catacgtatttacctaaagatacgttaatgactgagtcctctaccttacttactaaacaa
cacgaaacagcaattgatcagacgatgcttgaagacgtacttagtcaacttatagaagag
cagcggttgattaatgataatgatcatatcgcgataccaagtttgtattattcagaactt
aaaagtagccaaaatatctataaattaatgcataatcaagtatttatggatacgtttgat
caatcagacattcaattacatattggtgaaattgaagaatcaaatggcgtgacttatgct
gaggcacaaaaagaagcacttgaagctgcaatgcagaataaaatgatgattttaactggt
ggtccagggacgggtaaaacgacagtaatcaaagggattgtacacctctatgcggcctta
catggtatttctttaaattatgacgattacggagatgaagattaccccgtggtcctcgca
gcacctactggtcgtgcatcaaaaaggctacatgatgcgacgggtcttgaggctatgacg
attcatcgcttgataggttggaatcaagataccaagccagaagatattcttgataatgaa
attcatgcaaagcttatcattattgatgaaatgtcaatggtggatacatggctatttcat
caatttatggcagcagttcctgaagatgcacaagttgtattagttggtgatgaggaccaa
ttaccatcagtaggtccaggacaagtatttaaagatttaatctcatcaaaatcattaaag
cgcattaatttaaaagaagtataccgccaacaagatggttcaagtattattgcacttgct
cataacatgaaggcgggtttaaacgtagacattaccgagcggtttcatgatcgatccttt
attccttgtcatattgatcaaattccagaagttgttcgtaaagtcgtaacaaatgccgtg
agtaaaggttatgatatgtctgatattcaagtacttgcaccaatgtaccgtgggaatgcg
ggtattcataagctcaataaagtcctacaagatattttaaatccaattgaaaacgatgat
acaagagcaatacactttggagatattgtgtaccgaaaaggtgacaaagtacttcaactt
gttaatcgaccgaatgataatatttttaatggagatattggtgtcattgttggtatattt
tgggcgaaggaaaatgcactgaacaaagatgtggtcattgtggattacgaaggtaatgag
attacgtatttaaaatcggatctaacagaattaacacatgcgtattgtacgtcaattcat
aaagcgcaagggtcagaatttccaatcgtcattatgccgatagtcaagcaatattttcgg
atgcttcaaaagccaattctttatactggattaacccgtgcaaagcaatcacttgtattt
ttaggagattcagatgctttcaatattggtttgaaaacggaaggccaagtgagactcacg
cgacaacaatcctttttagaacaatattttaattctgaagagacatcgagtgaagtcatt
tcattaactgaagacacaatgtatagcattgatccaatgattaatatgcaaaatgtaagc
ccatacgattttatggaaattgacaatgtttaa
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