Sagittula sp. P11: CDO87_09955
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Entry
CDO87_09955 CDS
T05219
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDO87_09955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagu03400
]
CDO87_09955
Enzymes [BR:
sagu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CDO87_09955
DNA repair and recombination proteins [BR:
sagu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDO87_09955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AUC53494
LinkDB
All DBs
Position
2036309..2037775
Genome browser
AA seq
488 aa
AA seq
DB search
MHSVTLPRIGTFDAWRDAARALLSAGTPPESVLWSHGAQEGDLFGGDTPLPPVKGQITVP
KAFLPLAKLAVWHRDPQRFARLYTMLHALQTDRHLLGDRADPRVERLNAMAKEVSRDKHK
MTAFVRFRELGDPRANRRAFAAWFEPTHFILEPTAPFFAKRFGDMDWSIYTPDLTAHFDG
DLTFAEGAPKPPFPEDATEDLWRTYFRSIFNPARVKPKAMQAEMPKKYWKNMPEAQLIPE
LLAEADARAAEMAANAPTLAPARAAPILDRLRAEQAAKLDSQDAFLTALKGCRRCPLWEH
ATQPVAGEGPEDAALMFVGEQPGDTEDLTGRPFTGPAGQVFDTALHVNGIRRQEAFVTNA
VKHFKFRPRGKRRLHQNPDRDEIAHCKWWLDLEIQRVAPRLIVAMGGTALESLTGSRDGL
LKRRGRFEQTPEGTPILVTVHPSYILRLPDDRLRAEETARFQTDLALAARWLAGDAPDRL
AGTPASRA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcgtcaccctgccccggatcgggaccttcgacgcgtggcgcgacgccgcccgt
gcgcttctgtctgcaggaaccccgccggagagcgtcctctggtcgcacggggcgcaggaa
ggcgacctgttcggcggcgatacgcctttgccgccagtgaagggtcagatcaccgtcccg
aaagccttcctgcctctggcgaagctggccgtctggcaccgcgacccccagcggttcgcg
cggctctacaccatgctgcacgcccttcagaccgacagacacctgctgggggaccgcgcc
gatccgcgggtcgagcggctgaacgccatggcaaaggaggtctcgcgcgacaagcacaag
atgaccgccttcgtgcgcttccgcgaactgggcgacccgcgcgccaaccgccgcgccttt
gccgcatggttcgaaccgacgcatttcatcctcgaacccacggcgccgttctttgccaaa
aggttcggggacatggactggtcgatctacacgccggatctgaccgcgcatttcgacggc
gacctgacctttgcggagggcgcgccgaaaccgcccttccccgaggatgcgaccgaggat
ctttggcggacctacttccggtcgatcttcaacccggcgcgggtgaagccgaaggccatg
caggcggagatgcccaagaagtactggaagaacatgcccgaagcgcagctgatccccgag
cttctggccgaggccgacgcccgcgcagcagagatggcggccaatgcgccgacgctggcc
ccggcccgagccgcaccgatcctcgaccggctgcgcgccgaacaggcggcaaaactcgac
tcgcaggacgcgtttctcactgcgctgaagggctgtcgccgctgtccgctgtgggaacat
gccacgcagccggtcgcgggcgaggggccggaagatgccgcactgatgtttgtcggcgaa
cagcccggcgacaccgaggatctgaccgggcgaccgttcacagggcccgctggacaggtg
ttcgacacggcgttgcatgtgaacggcatccggcggcaggaggcctttgtcaccaatgcg
gtgaaacacttcaagttccggccgcgcggcaagcggcgattgcaccagaacccggacagg
gacgagatcgcgcactgcaagtggtggctcgacctcgaaatccagcgcgttgcaccacgg
ctgatcgtggccatgggcggcaccgcgctggaaagcctgaccggatcgcgcgacggcctg
ctgaagcgccgcggccggttcgaacagacgccggagggcacgccgatcctcgtcaccgtg
caccccagctacatcctgcgcctgccggacgacaggctgcgtgccgaggaaacggcccgg
ttccagaccgacctcgcacttgcggcccggtggctggccggggacgcgcctgaccggctc
gcagggactccggctagccgcgcgtga
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