Sagittula sp. P11: CDO87_17765
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Entry
CDO87_17765 CDS
T05219
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu03030
DNA replication
sagu03430
Mismatch repair
sagu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDO87_17765
03430 Mismatch repair
CDO87_17765
03440 Homologous recombination
CDO87_17765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sagu03032
]
CDO87_17765
03400 DNA repair and recombination proteins [BR:
sagu03400
]
CDO87_17765
Enzymes [BR:
sagu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDO87_17765
DNA replication proteins [BR:
sagu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDO87_17765
DNA repair and recombination proteins [BR:
sagu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDO87_17765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
RNase_H_2
Rv2179c-like
CyanoTRADDas_TM
Motif
Other DBs
NCBI-ProteinID:
AUC54901
LinkDB
All DBs
Position
complement(3659976..3661382)
Genome browser
AA seq
468 aa
AA seq
DB search
MFSGLSLRLRIFLFFCVIALGGTALAGAALWFGYTRALRTDDANGFTLAAILIAFGFTAL
CAGIWLLFDENVAKPIERLSAELRARAHAGIATRVDADAARYLGDLGPAASALSSQLSAS
TLASADRIAAETARLESEKARLTALLTEIPVATILVGNADQIVLYDGQAAEVLASQGIPR
LNAPVTDYFDGAALKGLRKQMNRTGREVTATLPGHDGAQSYDARLRPMDGGGYIILVDAS
HLDLPPEAARPLTYDFALLDQAPGALDAMPLGRLTYTVFDTETTGLLPHKDEIVQIGAVR
IVNGRIVPGERMDQLVNPGRPIPPASSKVHGVTDAMVATAPGIAEAGRRFHTFARDSVIV
AHNAPFDMAFLHRHKARMGVEWTHPILDTVLLSAILFGASQTHTLDALCDRLAVTIPPDL
RHTALGDAHATAEVFSRMLPMLEARGMATLSDVLAETKRHGRLIEDMN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttctccggcctcagcctccgactgcggatcttcctgttcttctgcgtgatcgcgctc
ggcggcacggcgctggcgggcgcggcgctgtggttcggctacacacgggcgctgaggacg
gatgacgccaacggcttcaccctcgccgcgatcctcatcgccttcggcttcaccgcgctc
tgcgccgggatctggctgctgttcgacgagaacgtggccaaacccatcgaacgcctctct
gccgaactccgcgccagggcacatgccgggatcgccacccgcgtcgacgccgatgccgcg
cgctacctgggcgacctcggccccgccgcctcggcgctcagttcgcagctctccgccagc
acgctggccagcgccgaccgcatcgcagccgaaaccgcgcgcctcgaatccgagaaggcc
cgcctgaccgcgctgctgaccgagatccccgtcgccacgatcctcgtgggcaacgccgac
cagatcgtgctctacgacgggcaggccgccgaggtgctggcctcgcagggcatcccccgg
ctgaacgcgcccgtgaccgactatttcgacggcgcggcgctcaagggactgcgcaagcag
atgaacaggaccgggcgcgaggtcacggccaccctgcccggccacgacggtgcgcaaagc
tacgacgcaaggctgcgcccgatggacggcggcggctacatcatcctcgtggatgcctcg
cacctcgacctcccgcccgaggccgcccgccccctgacctacgacttcgccctgctcgac
caggcgcccggcgcgctcgacgccatgccgctcggacggctgacctacacggtgttcgac
accgagacgacgggcctccttccccacaaggacgagatcgtgcagatcggtgcggtgcgc
atcgtcaacggacgcatcgtgccgggcgagcgcatggaccagctcgtcaacccgggccgc
ccgatcccgcccgcctcctcgaaggtgcacggcgtgaccgatgcgatggtcgccacggcc
ccgggcatcgccgaggccgggcgccgcttccacaccttcgcccgggacagcgtgatcgtg
gcacacaacgcgccgttcgacatggccttcctgcaccgccacaaggcacgcatgggcgtg
gaatggacccacccgatcctcgacacggtgctgctgtcggcgatcctcttcggcgcgtcg
cagacccacacgctcgacgcgctctgcgaccgcctggccgtgaccatcccgccggacctg
cgccacaccgcactgggcgacgcccacgccacggcagaggtcttcagccgcatgctcccc
atgctggaggcgcgcggcatggcgacgctctcggacgtcctcgcggaaacgaaacgccac
ggccgcctgatcgaagacatgaactga
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