Spiractinospora alimapuensis: J4H86_01970
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Entry
J4H86_01970 CDS
T07850
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
saiu
Spiractinospora alimapuensis
Brite
KEGG Orthology (KO) [BR:
saiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saiu03021
]
J4H86_01970
Transcription machinery [BR:
saiu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4H86_01970
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
TPR_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QVQ52628
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Position
455175..456386
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AA seq
403 aa
AA seq
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MTDTAALLDHVWREDGARLLGALARRIGDLGLAEDALQEAAAEALRTWSTDPPPNPAGWL
ATTARRRAIDRLRRADTEDTKLRVLAARAEEPAEDAGDDVVALLFGCCDPTLPADTRVML
TLRAVCSLTVPEIASAFLTTPTAVTQRLTRCRRRLRDSGVTFQVPHPEEFAPRLDSVLAT
IYLLHNEGYLATDASAGHRPDLVATSVRLGRELTTLMPRETEVAGLTALMELNQARGGQR
LDRDGGLLLLGEQDRHAWDQRLIAQASTRLERALARRRPGPYQVQAAIVALHTQAPDVAG
TDWRQIRLLYDRLYTLRPAALVRLSRAVATWHVRGAGAALDEVDALRADLEGNRLFHATR
SRLLEDLGRLDEATEATRRAVGLAMNPAERRLLGRRLHALSAR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgccgccctgctggaccacgtgtggcgcgaggacggcgcccggctgctg
ggggccctggctcgtcggatcggcgacctggggctcgcggaggacgcgctacaggaggcc
gcggcggaggcgctgcgcacctggtccaccgatccgccccccaacccggccgggtggctg
gccaccacggcgcgccgcagggccatcgaccggctgcgacgtgcggacactgaggacacc
aagcttcgggtcctcgccgcgcgggcggaggagccggcggaggacgcgggggacgacgtc
gtcgcgctgctcttcggctgctgcgaccccacgctgcccgccgacacccgggtcatgctc
accctgcgcgcggtgtgctcgttgaccgtcccggagatcgcgagtgccttcctcaccaca
ccgacagccgtcacgcaacgcctcacgcggtgtcggcgcagactgcgcgacagcggcgtc
accttccaggtcccacaccccgaagagttcgccccacgcctggattccgtcctcgcgacg
atctacctcctgcacaacgagggatacctggccacggacgcgtccgcgggacaccgtccc
gacctcgtcgcgacctccgtgcggttggggcgggaactgaccaccctgatgccgcgagag
acggaggtggccgggctcaccgcgttgatggaactcaaccaggcccgtggcggacaacgc
ctcgaccgcgacggcggcctgctgctgttgggggaacaggaccgccacgcctgggatcag
cgactcatcgcccaggcctcgacacggttggagcgggcgctggcgcgacggcgcccaggg
ccctaccaagtgcaggcggcgatcgtggcgctccacacccaggctccggacgtggccgga
accgactggcgccagatccggttgttgtacgaccgtctgtacaccctgcgccccgcggcg
ctggtccggttgagtcgggcggtggccacctggcacgtccggggtgccggcgcggcgctt
gatgaggtggacgcgttgcgggccgacctggagggcaaccgtctgttccacgcgacccgg
tcgcggctgctggaggacctcggtcgcctcgacgaggcgaccgaggcgacgcggcgggcc
gtcggcctggcgatgaaccccgcggaacggcggttgctgggccgacggctgcacgcactc
agtgctcgatga
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