Sphingopyxis alaskensis: Sala_1878
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Entry
Sala_1878 CDS
T00361
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sal
Sphingopyxis alaskensis
Pathway
sal00470
D-Amino acid metabolism
sal00550
Peptidoglycan biosynthesis
sal01100
Metabolic pathways
sal01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sala_1878
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sala_1878
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Sala_1878
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sal01011
]
Sala_1878
Enzymes [BR:
sal01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Sala_1878
Peptidoglycan biosynthesis and degradation proteins [BR:
sal01011
]
Precursor biosynthesis
Amino acid ligase
Sala_1878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
Rimk_N
Motif
Other DBs
NCBI-ProteinID:
ABF53590
UniProt:
Q1GRY2
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All DBs
Position
complement(1975366..1976292)
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AA seq
308 aa
AA seq
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MSRGPWHVAVLMGGWSAEREVSLMSGKGVADALESRGHKVTRIDMDRDVALRLAEAKPDV
VFNALHGVPGEDGTVQGMLDLMGFRYTHSGLVTSVIAIDKELTKQALVPHGIPMPTGTMV
DSESLFSVDPLPRPYVLKPVNEGSSVGVAIVRDDSNYGNPISRDALGPWQQFDRLLAEPF
IKGRELTVAVLGDTALAVTELRVKSGFYDYDAKYTDGLTEHVCPADVPDDVAQRMKDLAL
QAHRLLGCKGASRSDFRWDDEHGLAGIFLLEVNTQPGMTPLSLVPEQARAVGMDYAELVE
RIVEEALT
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagccggggtccgtggcatgtcgccgtcctgatgggcggctggtcggccgagcgcgag
gtgtcgttgatgagcggcaagggcgtggccgacgcgctcgaaagccgtgggcacaaggtc
acgcgtatcgacatggaccgcgacgtcgcgctgcggctggccgaggcgaaacccgatgtc
gtgttcaacgcgctccacggcgttcccggcgaggacggcacggtgcaggggatgctcgac
ctgatgggtttcagatatactcacagcgggctcgtcacctcggtgatcgcgatcgacaag
gaattgacgaagcaggcgctggtgccgcatggaatccccatgccgacgggaacgatggtc
gacagcgaaagcctcttttcggtcgaccccttgccacgcccctatgttctgaagcccgtc
aatgaaggctcgtcggtcggggtcgcgatcgtcagggacgacagcaattacggcaatccc
atttcgcgcgatgcactgggcccgtggcagcagttcgaccgcctgcttgccgaaccgttc
atcaaggggcgcgagctcaccgtcgcggtgctgggcgacacggcgctggctgttaccgaa
ctgcgcgtcaaatcaggcttttacgattatgacgccaaatataccgacgggctgaccgag
catgtctgccccgccgacgtgccggatgacgtcgcgcagcggatgaaggatctggcgctg
caggcgcaccggctgctcggctgcaagggggcgtcgcgctcggattttcgctgggacgac
gagcacggccttgcggggattttcctgctcgaggtcaatacccagcccggcatgacgccg
ctcagcctcgtccccgaacaggcgcgcgcggtcgggatggattacgccgaactggtcgaa
cgcatcgtcgaggaagcactgacatga
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