KEGG   Salinibacterium sp. dk2585: FVA74_07970
Entry
FVA74_07970       CDS       T06151                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sald  Salinibacterium sp. dk2585
Pathway
sald03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sald00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FVA74_07970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sald03400]
    FVA74_07970
Enzymes [BR:sald01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FVA74_07970
DNA repair and recombination proteins [BR:sald03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FVA74_07970
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_ligase_A_M LigD_N DNA_ligase_A_C DNA_primase_S
Other DBs
NCBI-ProteinID: QEE61517
UniProt: A0A5B9G651
LinkDB
Position
1696535..1699015
AA seq 826 aa
MATRDREADQVVNIDGKRLKLTSLDKVLYPETGTTKADVLDYYSRIAEVMIPHVANRPVT
RKRWVHGVGTADAPGQVFFQKNLDNSAPKWVARRDIQHSDHVNTYPLVNDRATLAWLGQI
AALEIHVPQWQFGRTGVRKNPDRLVLDLDPGEGAGLEECAEVARLARAILKDMGLEPFPV
TSGSKGIHLYAALDGRQDSDAVSAVAHELARALEADHPGLVVSDMKKALRKGKVLVDWSQ
NNGAKTTIAPYSLRGRLRPMVAAPRTWRELAQPGLRHLDYTEVLDRVRRRGDPLASLTAG
HLASLEPTRERLDSFDATPETVERLAKYRSMRDPDKTSEPMGGSASPSSDRPSFVIQEHH
ARRLHYDFRLEHEGVLVSWAIPKGVPTDPGTNHLAVQTEDHPLEYGAFEGSIPEGEYGGG
EVTIWDSGWYELEKWRDGKEVIATLHGEKHGTHRYALIHTGGRDGREENNWLIHLMAPKG
SSSARSKKTEAPDARAKTPREAPPEPPSPMLASAGDDGDRLLLQQERDDWAFEMKWDGIR
AIAVVDDSGVRLTSRNGRDLTHSYPELEELAEASEAFAILDGEIVAINRAGRPDFGRLQD
RMNLTKASDVEKAMERTPVHFMAFDVLWSAGRSLLKEPYDERRKVLVDTVNETERVKVPP
AFDGDLDSALEASTTLGLEGVLAKRRASTYTPGRRSKSWVKLKHNRTQEVVIAGWRPGSG
SRSGRIGSLLLGLPDAEGTLRYIGRVGTGFSEKQLDELQKTLRRRERKTNPLSDVPAADA
RDAVWVTPALVGEVEFTEWTRTGRLRHPAWRGLREDKTVDDVRLES
NT seq 2481 nt   +upstreamnt  +downstreamnt
atggccacgcgtgaccgggaagcagatcaggtcgtcaacatcgacggcaagcgcctcaag
ctgacgagcctcgacaaggtgctgtatcccgagacgggcaccaccaaggccgacgtgctc
gactactactcgcgcatcgcggaggtcatgatccctcacgtcgccaatcggcccgtgacg
cgcaagcgctgggtgcacggcgtcggaacggcggatgcgccgggccaggtcttcttccag
aagaaccttgacaactccgcacccaagtgggtcgcccgtcgcgacatccagcacagcgac
catgtgaacacctatcccctcgtcaacgatcgcgcgacgctcgcctggcttgggcagatc
gccgcgctcgagatccacgtgccgcagtggcagttcggccgcaccggcgtgcgcaagaac
cccgaccggctcgtgctcgacctcgaccccggcgagggcgccggcctcgaggagtgcgcg
gaggtcgcgcggctcgcccgagccatcctgaaggacatgggactcgagccgtttccggtg
acgagcggcagcaagggcatccatctctatgccgccctcgacgggagacaggactccgat
gcggtctcggccgtggcacacgagctcgcaagggcgctcgaggcagatcatccgggtctc
gtcgtgagcgacatgaagaaggccctgcgcaaggggaaggtgctcgtcgactggagccag
aacaacggcgcaaagacgaccatcgcgccctactccctgcggggtcggctgcgccccatg
gtcgcagcgccgcgcacgtggcgagaactcgcccagcccggcctgcgccacctcgactac
acggaggtgctcgatcgcgtgcgccgtcgcggcgacccgctcgcctcgctcacagcaggc
cacctcgcatcactcgagccgacgcgcgagcggctcgacagcttcgatgcgacaccggag
acggtcgagcggctcgcgaagtaccgcagcatgcgtgatcccgacaagacgagcgagccc
atgggcgggtccgcctccccctcatcggatcgcccctccttcgtcatccaggagcaccac
gcacggcgcctgcactacgacttccggctcgaacatgagggcgtgctcgtgagctgggcg
atccccaagggtgtgcccacggaccctggcacgaaccacctcgccgtgcagacggaagac
cacccgctcgagtacggggcgttcgaggggtcgatccccgagggcgagtacggcggtggc
gaggtgacgatctgggacagcggctggtacgaactcgagaagtggcgagacggcaaggag
gtcatcgcgacgctccacggcgagaagcacggcacgcaccgctatgccctcatccacacg
ggcggcagggacggcagggaagagaacaactggctcatccacctcatggcgcccaagggc
tcctcatcggcgcggtcgaagaagacagaggcgccggatgcccgtgccaagacaccacgc
gaggcgcccccagagcctccctcacccatgctggcctccgcaggtgacgacggcgacagg
ctgctcctgcagcaggaacgggacgactgggcgttcgagatgaagtgggacggcatccgg
gcgatcgccgtcgtcgatgactcaggggtgcgcctcacgagtcgcaacgggcgcgacctc
acgcacagctatccggagctggaggagctcgccgaggcatccgaggcatttgcaatcctg
gatggtgagatcgtcgcgatcaatcgcgcggggagacccgacttcgggcgcctgcaggat
cggatgaacctcacgaaggcgagcgacgtcgagaaggcgatggagcgcacgcccgtgcac
tttatggccttcgacgtgctgtggagcgcgggacgatcgctgctgaaggagccctacgac
gaacgccggaaggtgctcgtcgacaccgtcaatgaaacggagcgagtcaaggttccgccg
gcattcgacggcgacctcgacagcgccctcgaagccagcacgacgctcggcctggaagga
gtgctggccaagcgccgggcatcgacctacaccccgggccgccgttccaagagctgggtc
aagctcaagcacaatcgtacgcaggaggtagtcatcgcgggctggcgcccgggctctggc
tcccgtagcggccgcatcggctccctactgctcggcctgccggatgcggagggcaccctg
cgctacatcggccgcgtcggcacgggcttcagcgaaaagcaactcgacgaacttcagaag
accctgcggcgtcgcgaacgcaagacgaacccgctcagcgacgtgccagccgccgacgcg
cgcgacgccgtctgggtgacgcccgccctcgtcggggaggtggaattcaccgagtggacg
cgcaccggacgcctgcggcatcccgcgtggcggggcctcagggaggacaagaccgtggac
gacgtgcggctcgaatcctga

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