Saliniradius amylolyticus: HMF8227_00526
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Entry
HMF8227_00526 CDS
T05447
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
salh
Saliniradius amylolyticus
Brite
KEGG Orthology (KO) [BR:
salh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salh03021
]
HMF8227_00526
Transcription machinery [BR:
salh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HMF8227_00526
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AWL11022
UniProt:
A0A2S2E0F4
LinkDB
All DBs
Position
complement(520097..521071)
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AA seq
324 aa
AA seq
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MGHKKNTLVAEKANDKPDDVVETSKSDDNDPMEEIVASQDDIHRNLDATQLYLGEIGFSP
LLTAEEEVHFARRALKGDDAARQRMIVSNLRLVVKIARRYNNRGLPLLDLVEEGNLGLIR
AVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARELAQKL
DHEPTAEEIALALERPVEDVVKMLRLNERIGSVDTPIGSDNDKALLDIIADEKGQGPESE
LQNKDIKSSIVDWLFELNPKQREVLARRFGLLGYEPSTLEDVGSEIGLTRERVRQIQVEA
LRRLRDMLAHQGLNLESLFNTEQL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacaagaagaacaccctcgtcgctgaaaaagccaatgataaaccggacgatgtg
gtggaaacgtccaaatctgatgacaacgaccctatggaagagatcgtcgccagtcaggat
gatatccaccgcaacctggatgccacccaactctatctgggtgaaatcggattttcccct
ctactcaccgcagaagaagaagtgcattttgctcgtcgcgccttaaaaggtgacgatgca
gcccgacaacgtatgatcgtcagtaatttgcgcttggtggtgaagatcgcccgacgttat
aacaaccgtggcctgccacttttagatctcgtggaagagggtaacctgggactgattcga
gccgtcgagaaattcgatcccgagcgtggttttcgcttttccacctatgccacctggtgg
atccgacagaccatcgagcgggcgataatgaaccaaacccgcaccattcgtttgcccatt
cacgtggtgaaagagctcaatgtctatctgcgtgcggctcgtgaactggcccaaaagcta
gaccacgaacccacggccgaggaaatcgccctggcgttagagcgccccgtggaagatgtg
gtgaaaatgctgcgcttaaatgagcgtattggctcggtagacacccccatcggcagcgac
aatgataaggcattgctagacattatcgccgatgagaaaggccaggggcccgagtctgaa
ctgcagaataaagacatcaaaagtagcattgtggattggctgttcgagctgaaccccaaa
caacgtgaggtcctggcaaggcggtttggtcttctcggctacgaaccctcgaccctggaa
gatgtgggctctgaaattggcctgacccgtgagcgggtgcgtcaaatccaggttgaagcc
ttgcgccgccttcgggacatgctggctcatcagggactcaatctggaatcgctgtttaat
accgagcagctttaa
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