Silicimonas algicola: EF888_16220
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Entry
EF888_16220 CDS
T05779
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
salo
Silicimonas algicola
Pathway
salo00470
D-Amino acid metabolism
salo01100
Metabolic pathways
salo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EF888_16220 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
EF888_16220 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
salo01011
]
EF888_16220 (alr)
Enzymes [BR:
salo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
EF888_16220 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
salo01011
]
Precursor biosynthesis
Racemase
EF888_16220 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AZQ69750
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All DBs
Position
3314776..3315822
Genome browser
AA seq
348 aa
AA seq
DB search
MGAAHLTVDLDAVAANWRALDALSQPHVETGAAVKADGYGTGATDVARKLHASGVRSFFV
AVASEGVIIRRAVGTDADIHVFSGHMHGDTDLLQQHRLIPMLNAPEQVARHFQSAPGHPF
GVQLDTGMNRLGMERGDWDALKSELMDAGPRLVMSHLACADEPDHPMNAQQLHSFRTMTD
GIAHRRSLAATGGILLGTEYHFDLVRPGIGLYGGRPFDDATPVVALSAPIVQTRIVRPFE
TVGYGNTWTANVESCIATISAGYADGLIRGLGSNGRVWAGDVPCPIVGRVSMDLITVDVT
HLEEIPETLDILGPHQSVDDLADAAGTIGYEILTSLGHRYARHYEGAA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgggagccgcgcatctcaccgtcgatctcgatgccgtcgccgccaactggcgcgccctc
gatgccctgtcccagccccatgtcgagaccggagcggccgtcaaggccgacggctatggc
acgggtgcgacggacgtggcgcgcaagctccatgcctcaggtgtacgaagcttcttcgtc
gccgtcgcctcggaaggggtcatcatccggcgggcagtcgggacggacgccgacatccat
gtcttttccggccacatgcacggcgacaccgaccttctgcaacagcaccgactgatcccg
atgctcaacgcgcccgagcaggtcgctcggcacttccagtccgctcccggtcaccccttc
ggcgtccagctcgacaccgggatgaaccgcctggggatggagcgcggcgattgggacgcg
ctcaagtccgagttgatggatgcagggccgcgcctcgtgatgagccacctcgcctgcgcc
gacgaaccagaccatccgatgaacgcgcagcagcttcacagcttccgcaccatgacggac
ggcatcgcgcatcgccggtcgctcgccgcgacgggcggcatcctcctcggaaccgaatac
cacttcgatctcgtgcgccccggcatcggcctttatggcggtcggcctttcgatgatgcg
acgcccgtcgtcgccctctccgctccgatcgtgcagacccgcatcgtgcggcccttcgag
accgtggggtacggcaacacctggaccgccaatgtcgaaagctgcatcgccaccatctcg
gccggctatgccgacgggctgatccgcggcttgggatccaacggtcgggtctgggcgggc
gacgtcccctgccccatcgtggggcgcgtgtcgatggacctcattaccgtcgacgtgacc
cacctcgaggagatccccgagacgctcgatatcctcggcccgcaccaatcggtcgacgac
ctggccgatgcagcgggcaccatcggctacgagatcctgacctcgctcggccaccgctat
gcccgccactacgagggcgccgcatga
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