Silicimonas algicola: EF888_18440
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Entry
EF888_18440 CDS
T05779
Name
(GenBank) LuxR family transcriptional regulator
KO
K25873
LuxR family transcriptional regulator, quorum-sensing system regulator RaiR
Organism
salo
Silicimonas algicola
Pathway
salo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
salo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EF888_18440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salo03000
]
EF888_18440
Transcription factors [BR:
salo03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
EF888_18440
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_23
DUF134
Motif
Other DBs
NCBI-ProteinID:
AZQ69788
LinkDB
All DBs
Position
complement(3737573..3738253)
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AA seq
226 aa
AA seq
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MGSVESFDRLNDVIVGLRDVLETEHVIYHWVNSTGEHCAALTYSEEWTTRYLTQDYARLD
PVVQACLRQFNPVDWKRLDWSGRSVRAFVDEAVDAGVGNQGYSIPIRGPSGQFALFTVSS
RDDDAAWSRFTEARARELILISHFINQKALELERGSDTLKVVSLSPRETDALTLLALGHS
RAQAAESLSISEHTLRVYIEGARMKLAAMNTTHAVARALNQGLLIV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
ctgggttcggtcgaaagttttgatcggctgaacgacgtcattgtcggcctgcgggacgtg
ctggagaccgagcacgtcatctatcactgggtcaattcgaccggcgaacattgcgccgcg
ctgacctattccgaagagtggacgacccgctacctgacgcaggactatgcccggctcgat
cccgtggtgcaggcctgcctgaggcagttcaaccccgtcgactggaagcggctcgactgg
agcgggcgttcggtgcgcgctttcgtggacgaggccgtcgacgcgggcgtgggaaaccag
gggtattcgatcccgatccggggaccctcgggccagttcgccctgttcacggtgtcgagc
cgggacgacgacgcggcctggagccgtttcaccgaagcgcgtgcgagagagctgatcctg
atctcgcacttcatcaaccagaaggcgctggagctggagcgcggatcggacaccctgaag
gtcgtcagcctcagcccgcgcgagaccgatgcgctgacccttctggcgcttggacacagc
cgggcgcaggcggccgagagcctgtcgatctcggagcatacgctgcgcgtctatatcgaa
ggcgcgcggatgaagctggcggcgatgaacacgacccacgccgtcgctcgcgccctgaac
caggggctgttaatcgtgtga
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