Salvelinus sp. IW2-2015 (Arctic char): 111958283
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Entry
111958283 CDS
T05762
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111958283
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111958283
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
U-box
zf-RING_2
Prok-RING_4
zf-Nse
Gp58
Vps23_core
zf-RING_6
DUF4200
CorA
Gpi16
End3
Motif
Other DBs
NCBI-GeneID:
111958283
NCBI-ProteinID:
XP_023835282
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Position
LG34:4870800..4874888
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AA seq
470 aa
AA seq
DB search
MASRSASPEEDLSCPFCHEIFKDPVVLSCSHSVCKACLQQYWKQRRSQECPVCRKRSRSK
GNPPCNLVLKNLCEAFLQERRQRDSGESEERCNLHNEKLKLFCLDDKQPICVVCQTSRKH
KNHNCCPIDEAAQYQKEELQTFLKPLQEKLEVFNKVKQTCNQTVKHIKSKAQSTEIRIRK
EFEKLHQFLREEEEVRIAVLREEEEQKSQVMKEKIEEMSGEISSLSDTIRALEKELRAED
ISFLQNYKATVVRTQCTLPDPQLVSGALIDVAKHLGNLQFRVWEAMQGIVKYSPVTLDPN
TAHPGLVLSENLTIVKCTNEKQQLPDNPERFDYYAWVLGSEGFNSGTHSWDVEVGNNTFW
SLGVMEKSVQRKGAVNTGHWRFWHFKGKYGAFSPPESTSVLPVAKKPKRIRVQLDWDRGA
LSFSDPDENTCLHTITHTFTERVFPYLGSYCKLSPLRIVPAKASVNVQHS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagatcagcttctcctgaggaggatctctcctgtcctttttgccatgaaatc
ttcaaggatcctgtggtcctgtcgtgtagtcacagcgtctgtaaagcctgtctgcagcaa
tactggaaacagaggcgatctcaggaatgtccagtgtgcaggaagagaagcagatcaaaa
ggcaatcctccctgtaacctggtcttaaagaacctgtgtgaggcattcttacaggagagg
aggcagagagattcaggggagtctgaggagcgctgcaatctgcacaacgagaaactcaag
ctcttctgtctggacgataaacagcccatctgtgtggtgtgtcagacctccagaaaacat
aaaaaccacaactgctgccccatagacgaagctgcacagtatcaaaaggaggaactccag
actttcctgaagcccttacaggagaagctggaggtctttaataaagttaaacaaacctgt
aaccaaacagtaaaacacattaagagcaaggcccagagcacagagatacggattagaaag
gaatttgagaagctccatcagtttctacgagaggaagaggaggtgaggatagctgttctg
agggaggaagaggagcagaagagtcaggtgatgaaggagaagattgaggagatgagcgga
gagatatcatcactttcagacacaatcagagccttagagaaggagctgagagctgaagac
atctcattcctacagaactataaggccacagtggtaagaacccagtgcacactgccggat
ccacagctggtctcaggagcgctgatagacgtggccaaacacctgggaaacctgcagttc
agagtctgggaggcgatgcaggggattgtgaaatacagtcctgtcactctggaccctaac
actgcccacccaggtctcgtcctatctgagaatctgaccattgtgaaatgcacaaatgag
aaacagcagctccctgataacccagagaggtttgattactatgcatgggtcttgggttct
gagggctttaactcagggacacacagctgggacgttgaggttgggaacaatacattctgg
tcactgggtgtgatggaaaagtctgtccagaggaagggagcagttaatactggacactgg
cgattctggcacttcaaaggtaaatacggtgcattttccccaccagaatcaaccagtgtc
ctccctgtggcaaagaaacccaagaggatcagagtgcagctggactgggacagaggagcg
ctgtcattctctgaccctgatgagaacacatgtttacacactattacacacactttcact
gagagagtctttccgtacttgggtagttactgcaagctctcccctctgagaatcgtacca
gcgaaggcctctgtaaacgtacagcatagttag
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