Salvelinus sp. IW2-2015 (Arctic char): 111958806
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Entry
111958806 CDS
T05762
Name
(RefSeq) condensin complex subunit 1
KO
K06677
condensin complex subunit 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111958806
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
111958806
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
Adaptin_N
HEAT_2
PDS5
HEAT
Cnd3
TAN
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
111958806
NCBI-ProteinID:
XP_023835847
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All DBs
Position
LG35:628780..635557
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AA seq
1409 aa
AA seq
DB search
MSWDFFVPVCVGDLVKTGGINQYVVQDVVSPKQLPSHLNSFKAALRSQGPLCILEHFDTG
YTVLQHCHKVDMSVKEDTLELLIQVVSGLSVSLPSLLLNASLSAPDRKEQLNAVKMSVFL
LCKLTEILESDSYRQSIVTAPSKGSKKGKVAGEGLLQWDSERETVLQALTQLLQLDIRSL
WSLSLVEEEFISCVTCCCYKLLENPTISHVKNKPTRDAIIHLLGVQVKKYNHLLGASVKV
IQLLQHFDQLSSVCAQAVSVWSTEYGVKAIVGEVMREIGQKSSEELAREGSGVKAFSSFL
SELGTLVPDTMIPNISVLLTHLEGESPSLRVAVCEVLGEVLVRVLSGDALDESGRADRDR
FMDTLQEHLHDTHSYVRARVLQVYTRIVNSKALPLNRYSEVMGLAVGRLMDKSINVVKSA
IQLLAAFIAHNPYSCKLSSADLKKPLEKETDKLRELRERLQENAPVAVIKASELWAAMEP
ELLFTVRAELEPTSEGEGEQQEREEDEAGEEDDRATAVQIAQFLRVNKYRNAVRLCVRAH
SLFPESEMFSSLTTLTAETLLDTLALLFKGPDQDTSEIREDLPSTPQKEGAGDGGKEGVE
ESELKKQEMLLQYLRDTESFALQVERAIAVINTMLYWKTTSVVQEAVQFCVTVCEFSVAN
SLTGVRKMLPLVWSTDAAIKDAVVQAYRRLYLNPQGDNTRAKAQTLVDSLSELMVDASLG
TIQCLEEIVQEFFGGGSSLQSTVVQVLWERFTGKRETSSLHRRAAVLLLGMAARAEREVV
LSNLDTLCSVALGEKLTEDFLLARDSVITICNITDHVRQCKGAPFRLPQDNQLFTCLTQA
IAEGVVMADPHWQSFMEQAVRLLYFLSESPDQLCSRLLQRCSRLLLDQIAEGGEMLANKD
VSQLPGASQDPEEQGEQVPAVSCVSLAQLLSLCGCVAFWQVSHLERSVSSELRRRRGETE
EREEKAKVPSRKAKQAANDSSVEEELGLMGASAEDTEAELIRKICETELLAEENLLCSFL
PLLVRVCSSPGRYCHPQLTTAACLALSQYMMISPSVCEEHIRLLFTVLERSSLPVVRANA
IIGLGDLTVRFPNILEPWTQNLYTRLSDENPAVRQTAVTVLTQLVLKDVLKVKGQVSEVA
VLLIDPQTHIASLALNFFNELASKDNAIYNLLPDIISRLSDPERAMNEEDFHTIMKQLFS
YITKERQTESLVEKLCQRFRTAKTERQWCDLAVSLSLLSMCERGLKRLQECWECYSDKLT
ETGVYQPLLSITAKLRRGAKPQLKVQVEEFEKRLTAVHTRGLENVESSEMEKNQPEGAAP
SQNTTHTPLPNKGRGGRPKRGQAKPSVASRHDDSFVTPKPTRKSSKKAVITFSSDEEEEE
EEDAVMAESETPKVTTPIARTSRRARLRH
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggacttctttgtgcctgtgtgcgtgggtgacctggtgaagactgggggcatt
aaccagtacgtggttcaggatgtcgtctcccctaaacaacttccctcccatctcaacagt
ttcaaggctgcactgagaagccagggtccattgtgcatcctggaacacttcgacacgggt
tacactgtgctgcagcattgtcataaagtggacatgagtgtgaaagaggacaccctggag
ttactcatacaagtggtgagtggcctgtccgtctccctgccctccctcctcctcaatgcc
tcactctccgcaccggaccgcaaggagcagctcaatgctgtcaaaatgagtgtgttcctc
ctctgcaagctcacagaaatcctggagagtgactcttacaggcagagtatcgtcactgca
cccagtaagggcagtaagaaggggaaggttgcaggagaaggtttactacagtgggactct
gagagggagacggtgctgcaggctctaacccagctccttcagctggacatccgctccctc
tggagcctctctttggtcgaggaggagttcatcagctgtgtgacatgctgctgctataag
ctcctggagaacccaaccatcagccacgtaaagaacaagcccaccagagacgccatcatt
cacctgctgggggtgcaggtcaagaaatacaaccacctcctgggtgccagtgtgaaggtg
atccagctgctgcagcactttgatcagctgtcgtctgtgtgtgcccaggctgtgtctgtg
tggagcactgagtatggagtcaaggctattgtaggagaggtcatgagagagatcggtcag
aagtctagtgaggagctggccagagaggggtcaggggtcaaggccttctccagcttcctg
tctgaactgggcaccctggtccccgacaccatgatccccaacatcagtgtgttactcaca
cacctggagggcgagagccctagtttgcgtgtggcagtgtgtgaagtgttgggagaggtt
ctggtcagggtcctgagtggagatgcactggatgagtctggcagagctgacagggaccgc
ttcatggacacactgcaggagcacctccatgacacacactcctacgtcagggcccgagtg
ctgcaggtctacacacgcatcgtcaacagcaaggctctgcccctgaacaggtacagtgaa
gtgatggggttggcagtgggaaggctgatggacaaatccatcaatgtggtcaagagtgcc
atccagctactggctgccttcatagcacacaacccctacagctgcaagttgagcagtgct
gacctgaagaaacccctggagaaggagacggataaactccgcgagcttagagagagactg
caggaaaacgcacctgtggcagtgatcaaggcctccgaactgtgggccgctatggagcct
gagctgctcttcaccgtcagagccgagctggagcccaccagtgagggagagggggaacag
caggagagggaggaggacgaggctggagaggaggacgacagggccaccgccgtacagatc
gcccagttcctccgcgtcaacaaataccggaatgcagtgcgtctgtgtgtgcgagcccac
agcctgttcccagagtctgagatgttctcgtctctgaccactctcaccgccgagactctc
ttggacacactggccctgctcttcaaaggtcctgaccaggacacctctgagatcagagag
gacctgccttccacccctcagaaggagggagcaggggatggagggaaggaaggggtggag
gagagcgagctgaagaaacaggagatgctgttgcagtatctgagagacactgagagcttt
gccctgcaggtggagagagccatcgctgtcatcaacaccatgctctactggaagactacc
tcagtggtccaggaggcrgtgcagttctgtgtgacagtatgcgagttcagtgtggcgaac
tctctgactggtgtgaggaagatgctgcctctggtctggtctactgacgctgccattaaa
gatgctgtggtgcaggcctacagacgcctctacctcaacccccagggagataacaccagg
gctaaagctcagactctagtggacagtctgtctgaactgatggtggatgcctctctgggg
acaatccagtgtctggaggagatagtccaggagttttttggtggtggcagcagcctgcag
tccacggtagtgcaggttctgtgggagaggttcactggcaaacgagagacctccagcctg
cacagacgagcagcagtactgcttctgggaatggctgcacgagcggagagggaggtggtc
ctcagtaacctggacactctgtgctctgtggctctgggagagaagttgactgaagacttc
ctactggccagagactctgttatcaccatctgtaacatcactgaccatgtcaggcaatgc
aaaggagctccattcagactgcctcaggacaaccagctctttacctgcctcacacaggcc
atcgctgaaggtgtggtgatggcggaccctcactggcagagcttcatggagcaggctgta
cgtctgctgtacttcctgtccgagtccccagaccagctctgctcccgcctcctccagcgc
tgctctcgcctgctattggaccagatcgcggagggcggggagatgttagcaaacaaggat
gtcagccagttgccgggtgcatctcaggaccctgaggagcagggagaacaagtccctgcg
gtgagctgcgtgtccctggcccagctgctgtctctgtgtggctgcgtggcgttctggcag
gtgtcccacctggagcgcagcgtcagctctgagctgcggaggaggagaggagagacagaa
gagagggaggagaaggcgaaggtaccctcccgtaaggccaagcaagcggccaatgacagt
tctgtggaggaagaacttgggttgatgggtgcttctgctgaggacaccgaggctgagctg
atcaggaagatctgtgagactgagctgctggctgaggagaacctgttgtgctcgttcctg
cccctgctggtgagggtgtgtagttccccagggagatactgccacccccagcttaccacc
gctgcctgcctggccctctcacagtacatgatgatcagtccgtcagtgtgtgaggagcac
atccgtctcctgttcacggtgctggagcgttcctctctgcccgtcgtcagggccaacgcc
atcatcggcctgggagacctcaccgtccgcttccccaacatcctggagccctggacccag
aacctctataccaggctgagtgacgagaacccggcggtgaggcagactgcggtgactgtt
ctgacccagctagtgctgaaggacgtgctcaaggtcaaaggtcaggtcagtgaggtggct
gtgctgctcatcgacccccagacacacatcgccagcctcgcactcaacttcttcaacgag
ctcgcctccaaggacaatgctatctataaccttctcccagacatcatcagcagactgtcc
gacccagagagagccatgaacgaggaagacttccacaccatcatgaagcagctgttttcc
tacatcactaaggagagacagactgagtctctggtggagaagctgtgtcagcgcttcagg
accgcaaagactgagcgtcagtggtgtgacctggccgtgtctctgtctctgctgtctatg
tgtgagcgagggctgaagaggctccaggagtgttgggagtgttacagtgacaagctgact
gagacaggagtctaccagcctctcctctccatcactgctaagctacgccgaggagccaag
ccacagctcaaggtccaggtggaggagtttgagaagcgtctgacggcggtccacacccgg
gggctggagaacgtagagagctctgagatggagaagaaccagcccgagggagctgcgccc
agccagaacaccactcacacgccactacccaacaagggacggggtggcaggcccaagaga
ggtcaagccaagccctctgtagccagtcgccatgacgatagctttgtgacccctaaacca
acccggaagtcctccaagaaagctgttatcaccttcagcagtgacgaagaggaggaggag
gaagaagacgctgtcatggcagagagtgagacacctaaggtgaccacacccatcgcccgc
acctctcgacgtgcccgtctccgacactga
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