Salvelinus sp. IW2-2015 (Arctic char): 111964582
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Entry
111964582 CDS
T05762
Symbol
setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00310
Lysine degradation
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111964582 (setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111964582 (setdb1)
Enzymes [BR:
salp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
111964582 (setdb1)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
111964582 (setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
111964582 (setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
DUF4537
NatB_MDM20
Motif
Other DBs
NCBI-GeneID:
111964582
NCBI-ProteinID:
XP_023844197
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All DBs
Position
LG6.1:562939..586317
Genome browser
AA seq
1340 aa
AA seq
DB search
MDNNDGMEVEGWDSGLEEELGVSLEELSKWIEEEVERSEAVRQRKAQLAELKEWVEQKEK
EEEVVDKLFNNANQSIVECEALVKSTYSKMGLVYKESSSEDEGGVGGVQSSDVIEIEDDD
DDDDVIAVGLLVPPKKPGIPVQDAMFKEASAALQRSSQQVLKLAQTVNKNSSSGPAIQQP
GGPVPMPAVFVSQATPRNTPTQPNPSLKDDEIRLEMSLLGKKRTKTWHSGMLIAINPVGN
GYSKYKVKFENKGKSLLSGNHIAFHYHPTLERLYVGARVVAKYKDGNQVWLYAGIVAEMP
NNKNRMRFLIFFDDGYASYVTLPELYPVCRPMKRTWEDIEDASCKDFIEEYITSYPNRPM
VLLKAGQVIKTEWEGTWWRSRVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNLKTNC
ANTQEKKMAGQQRTRPSMGALRTKGPVVQYHSGGNTTTPGGTPTKSPHPLSPPSSIPPTP
SQPNQLARTDPKYQMAKKSTSPYIPTPGGSRTGLASNSHAPKAMQPQPSTGSPGNSSRMY
VLQTGNIQTLTSLQPIQHQQQSLPPPPQAPPTAPAPAVTPYTFSNDRIPHEPSYRAPTDR
IFYLPHTCQHACLNRIRPSRPDMHRGRNPLLTPLLYEFRRMTGRRRVNRKMSFHVIYKSP
CGLCLRSMAEIQRYLFQTHCDFIFLEMFCLDPYVLVDRRFQPQKPYYYIRDITNGREDIP
LSCVNEIDITPPPDVAYSKERIPEDGVFINTSPEFLVGCDCIDGCRDKSKCWCHQLTLQA
TACTPGAQINHTAGYTQKRLEECLPTGIYECNKRCKCCSQMCTNRLVQHGLQVRLQLFKT
QNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGY
ESEAHCSDSDGSGVDMSRLKNPPSSSLALQNKTLPKPPQRTNAANPAGKARGAGGDSSKD
GDSDEESNNDKSSDDTFVKDPYYSSSSVWRSYTTRRQAKGVKEGSQDSKDGMSVSVGGKE
DRKPPPMPEESGKSKVASWLTNQPSTSQATVKMEGLKIEKKEPGDQKSQQSVKTEGGKRQ
DVMTLSDSDDVQTISSGSDDNKWEEEIGGGGTMGEGGEVGVEGAGGKKKNGGRGKQVRRG
GSWGCGFIDLCVLSGITRPVHVVLLPELTLSLLPFILLSSLSLPPVSGAVKRQVAVKSTR
GIALKNSHGLMVKTGGAGMGPGGGPGGHGGAQGKGGDGGDSGPKNTRQFFDGEESCYIID
AKLEGNLGRYLNHSCSANLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGS
VEGKELLCCCGSTECRGRLL
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggacaataatgatgggatggaggtggagggctgggactctggtctggaggaggaactg
ggtgtgtctctggaggagctgagtaagtggattgaggaggaggtggagaggagcgaggca
gtccgccagaggaaggcccagctggctgagctcaaagaatgggtggagcagaaagagaag
gaagaggaggtggtggacaaactcttcaacaatgccaaccagtccatagtggagtgtgag
gctctggtgaagtccacctacagtaaaatgggtctggtctacaaggagagctcttcagag
gatgagggtggagtgggaggggttcagtcctctgatgtcatagaaattgargatgatgat
gacgatgatgatgtcatcgctgtgggcttactggttccacccaagaaacctgggatacct
gtccaggatgcaatgtttaaggaggcgtctgcagctctccagcgttcctcccagcaggtg
ttgaagctggcccagacagtcaacaagaactcttcttctgggcctgctatacaacagcca
ggtggcccagtgcccatgccagcagtgtttgtgtcccaggccacgcccaggaacacaccc
acccagcctaacccctccctgaaggatgatgaaatcagactggagatgagtcttctggga
aagaaacgcaccaagacctggcacagcggaatgctcatcgccatcaaccctgtcggtaat
ggttacagtaagtacaaggtgaagtttgagaacaaggggaagagtctactgtctgggaac
cacatagcgtttcactatcaccccaccctggagaggctgtacgtgggagccagggtggtc
gccaagtacaaggacggcaaccaggtctggctctacgctggcatcgtggcagagatgccc
aacaacaagaaccgcatgaggttcctgatcttctttgacgacggttatgcctcctacgtg
accctgcctgagctctaccctgtctgcagaccaatgaagcgtacatgggaggacatagag
gatgcatcgtgtaaagacttcatagaggagtatataacgtcataccccaacaggcccatg
gtgctgctgaaggcaggccaggtcatcaagacagagtgggaggggacgtggtggaggagc
agagtggaggaggtggacggcagcctcgtcaagatcctcttcctggatgacaagcgtagt
gagtggatctaccgcggttcaaccaggctggagcccatgttcaacctgaagactaactgt
gccaacacccaggagaagaagatggctggccagcagaggacacgccccagcatgggagca
ttgaggaccaagggccccgtggtccagtatcacagtggggggaacaccacaacccccggc
gggacccccactaaatccccccatcccctctccccaccctcctccatccctcctacaccc
tcccagcccaatcagcttgcacgaacagatcctaagtatcagatggctaagaagagtact
tctccatacattcccacgccaggaggctctcgcactggattggccagtaatagccacgcc
cctaaagccatgcagccccaaccttcaactggttctcctggaaactcatccagaatgtat
gtccttcagactggcaacatccagactctcacgtccctacagcctatccaacaccagcag
cagtctctgccccctcctccccaagcccctcccaccgcccccgcacctgcagtgacccca
tacaccttcagtaacgaccggattccccacgagccctcgtaccgcgcccccacagaccgc
atcttctacctgcctcacacctgccagcatgcttgtctcaaccgtatccggccctccaga
ccagatatgcaccggggcaggaaccccctgctcacccctctactctacgagttcagacgc
atgacggggcgacggagagtcaaccgcaagatgtcgttccatgtgatctacaagtctcct
tgtgggctgtgtctgcgcagcatggcggagatccagcgctacctgttccagacgcactgt
gacttcatcttcctggagatgttctgcttggacccctatgtcctggtcgaccggcgcttc
cagccccagaagccttactactacattcgagacatcaccaacggccgcgaggacattccc
ctgtcctgcgtcaacgagatcgacatcacaccgccccccgacgtggcctacagtaaggag
cgtatccctgaagatggagtgttcatcaacaccagtccagagttcctggtgggctgtgac
tgtatcgacggctgcagggacaagtccaagtgttggtgtcaccagctgaccctgcaggcc
acagcctgtacccctggagcacagatcaaccacacagctggatacacacagaagagactg
gaggagtgtttgcccaccgggatttatgagtgtaataagcgttgtaagtgctgcagtcag
atgtgtactaaccgtctggtgcagcacggtctgcaggtgaggctgcagctctttaagacc
cagaacaaaggctggggcatccgctgtctggacgacgtggccaagggatccttcgtctgt
atctacgcaggtaagattctgacagatgactttgcggacaaggagggactggagatgggt
gatgagtactttgctaacctggaccacatagagagtgtggagaacttcaaggaagggtat
gagagtgaggcccactgttcagacagtgacgggagcggggtggacatgtccaggctgaag
aaccccccctcgtcctccctggctttgcagaacaagacccttcccaaacccccccagaga
accaatgctgccaaccctgctggcaaagcgcggggtgctggtggcgactcctctaaggat
ggggatagtgatgaagagtcgaacaacgacaaaagttcagacgacacgtttgtaaaggac
ccctactacagctccagctctgtgtggaggagctacaccacccgtcgccaggccaagggc
gtcaaggaagggagccaggacagtaaggatgggatgagtgtgtcagtggggggaaaggag
gacaggaagccgccccccatgccagaggagagtgggaagagtaaagtagcgtcctggctc
accaaccaaccctctacctcccaggccaccgttaagatggagggactgaagatagagaag
aaggagcccggagaccagaaaagtcaacaatcagtgaagacggagggagggaagaggcag
gatgtgatgacgctgtcggacagtgatgacgtccagaccatcagctctggatctgacgac
aacaaatgggaggaggaaattggagggggaggaacaatgggagaagggggagaggtaggg
gttgagggggcaggggggaagaagaagaatggggggaggggaaaacaggtgaggagaggg
ggaagttggggctgtgggttcatagatctctgtgttttatcaggtattaccagacctgtt
catgtggtgcttctccctgaattgaccctttctcttctccccttcatcctcctctcctcc
ctctccttgcctcctgtctcaggtgcggtgaagaggcaggtggctgtgaagtccacgcga
ggcattgctctaaagaactcccatggcctgatggtgaagactggaggggctgggatgggg
ccagggggaggcccggggggccacggaggggcacagggtaagggtggggacgggggagac
agtggacctaaaaacacacggcagttcttcgatggggaggagtcctgctacatcatcgac
gccaagctggagggcaacctgggacgctacctcaaccacagctgcagtgccaacctgttt
gtccagaatgtgtttgtagacacacacgatctgcgtttcccctgggtagccttcttcgcc
agcaagcgtatcagggcggggacagagttgacatgggactataactacgaggttggcagt
gtggagggaaaggagctactgtgctgctgtggctcaacagagtgcagaggaagactgcta
taa
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integrated database retrieval system
