Salvelinus sp. IW2-2015 (Arctic char): 111965826
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Entry
111965826 CDS
T05762
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111965826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111965826
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
111965826
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
AATF-Che1
XRCC4
DUF4524
Motif
Other DBs
NCBI-GeneID:
111965826
NCBI-ProteinID:
XP_023845927
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Position
LG6.2:11555819..11569281
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AA seq
322 aa
AA seq
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MNSMKDPLNLDHHHHHHHHHQTGTKLSSTHHKALAMASSLQPLQRSVDSKHRLEVHTVSD
TSSPESVEKDSKGQSKNDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTR
EEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPSYT
YNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMSMTSSMVPSSVTGVP
GSSLNSLNNLNNLSNPSLNSGVPTPTCPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFG
YTSVQNPGSNLSACQYAVDRPV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatgaaggatccattgaatttagaccatcaccaccaccaccaccaccaccac
caaaccgggactaaactctcttccacgcaccacaaggcactagcaatggcctctagtctg
cagccgttgcagcggtctgtggactccaaacaccggttagaggtacacacagtatcggac
acctccagtccagagtccgtagagaaagactcaaagggccagagcaaaaatgacgactct
tcagatgacccttctaaaaagaagcgacagaggcgacagaggactcacttcacaagccag
cagctacaggaactggaggccacgttccagcggaatcgctatccggacatgtctacaaga
gaggagatagccgtgtggaccaacctcacagaggcccgcgtcagggtttggttcaagaac
cggcgagcaaaatggaggaaaagggaaaggaatcaacaagctgagctatgcaagaacggc
ttcggtcctcagttcaatggacttatgcagccctacgatgatatgtaccccagctacacg
tataacaactgggccgccaaagggctaacttcggcctccttgtccaccaaaagcttccct
tttttcaattccatgaacgtcaaccctttgtcatcgcagacgatgttctccccgcccaac
tccatctcttcaatgagcatgacctccagtatggtgccgtcctcggttactggcgtgccc
ggttcgagcctcaacagcctcaataatttaaacaaccttagcaacccctctctgaattcg
ggagttcccacgccaacctgcccgtacgccccgccgacccctccttatgtgtacagggac
acttgtaactccagtctggcaagcctgagactgaaagccaagcagcactcgagttttgga
tacaccagtgttcagaatccaggctcaaatctgagcgcgtgccagtacgccgtggataga
ccagtgtaa
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