Streptomyces noursei NK660: DC74_6447
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Entry
DC74_6447 CDS
T03082
Name
(GenBank) putative ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
salu
Streptomyces noursei NK660
Pathway
salu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
salu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DC74_6447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salu03400
]
DC74_6447
Enzymes [BR:
salu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
DC74_6447
DNA repair and recombination proteins [BR:
salu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
DC74_6447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
AIA06882
LinkDB
All DBs
Position
complement(7362663..7363643)
Genome browser
AA seq
326 aa
AA seq
DB search
MAPTPGGGGAAPPLYPVIRPMLAVLGPLPPEHEQADWAFEAKWDGARCLVNAPGDGTIRL
VTRAGNDATTTYPELGPLGQQLRGRPAVLDGEVVVLDPSGRPDFGLLQRRMGVLNPRRTA
RLAMELPAQLVLFDVMYLAGPLVDAPYHARRAVLEGLGLAGPNWSVPGYLAGHGDRAWQA
ALRGGLEGVVAKRLSSPYLPGVRSPDWVKTKHVESLDVVIGGWTEGHGALGGLPGSVLAG
VVEPGGLRFVGAVGSGLSDAERRELASYLGVIPLDRSPFVNPVDQTGVHWTEPRLVAEIT
FSGWTSAGRIRHPVWHRLRPDLTRLG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccccgacccccgggggcggcggcgcggccccgcccctgtatcccgtgatccggccg
atgctggccgtgctcgggccgctgccgcccgagcacgagcaggccgactgggcgttcgaa
gccaagtgggacggggcccggtgcctggtcaacgcgcccggcgacggcacaatccggctg
gtcacccgggccggcaacgacgccaccaccacctacccggagctggggccgctcgggcag
cagttgcgcgggcgccccgccgtgctggacggcgaggtggtggtgctggacccgtccggg
cggccggacttcgggctgttgcagcgtcggatgggcgtgctcaacccgcgccgcaccgcc
cggctggcgatggagttgccggcgcagctggtgctgttcgacgtgatgtacctggccggg
ccgctggtggacgcgccgtaccacgcgcggcgggcggtcttggagggcctggggctggcc
ggccccaactggtcggtgccggggtacctggccggccacggcgaccgggcgtggcaggcg
gcgctgcgcggcggcctggaaggcgtggtggccaagcggctgtcctcgccgtacctcccc
ggggtgcgctcgcccgactgggtcaagaccaagcacgtggagtcgctggacgtcgtcatc
ggcggctggacggaggggcacggggcgctcggcgggctgcccgggtcggtgctggcgggc
gtggtggaaccgggtgggctgcggttcgtgggcgccgtcgggtcgggcctgtccgacgcc
gagcgacgggaactggcgagctacctcggcgtgatcccgctggaccgctcgccgttcgtc
aaccccgtggaccagacgggggtgcactggacggaaccccggctggtggccgagatcacc
ttcagcggctggacctcggcgggccggatccggcatccggtctggcaccggctgcggccc
gacctgacccggctgggctga
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